Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039807729.1 |
| length | 864 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 5 |
| gene id | LOC120563522 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053119.1 |
| NCBI id | CM020916.1 |
| chromosome length | 42187026 |
| location | 20256444 ~ 20257777 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0043292 | contractile fiber | cellular_component |
| GO:0044449 | obsolete contractile fiber part | cellular_component |
| GO:0036379 | myofilament | cellular_component |
| GO:0005861 | troponin complex | cellular_component |
| GO:0005865 | striated muscle thin filament | cellular_component |
| GO:0030016 | myofibril | cellular_component |
| GO:0030017 | sarcomere | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU116787 | lncRNA | downstream | 3918 | 20250890 ~ 20252526 (-) | True | G86660 |
| TU116779 | lncRNA | downstream | 14594 | 20241433 ~ 20241850 (-) | True | G86652 |
| TU116708 | lncRNA | downstream | 240632 | 20014338 ~ 20015812 (-) | True | G86605 |
| TU116662 | lncRNA | downstream | 433071 | 19821540 ~ 19823373 (-) | True | G86575 |
| TU116652 | lncRNA | downstream | 479401 | 19774307 ~ 19777043 (-) | True | G86566 |
| TU116815 | lncRNA | upstream | 144967 | 20402744 ~ 20461823 (-) | True | G86686 |
| TU116909 | lncRNA | upstream | 441038 | 20698815 ~ 20699637 (-) | True | G86761 |
| TU117040 | lncRNA | upstream | 650612 | 20908389 ~ 20908590 (-) | True | G86853 |
| TU117182 | lncRNA | upstream | 844853 | 21102630 ~ 21103379 (-) | True | G86976 |
| XR_005639947.1 | lncRNA | upstream | 882730 | 21140507 ~ 21146513 (-) | True | LOC120563411 |
| XM_039807725.1 | mRNA | downstream | 24 | 20255366 ~ 20256420 (-) | True | LOC120563520 |
| XM_039807727.1 | mRNA | downstream | 1106 | 20252799 ~ 20255338 (-) | False | bncr |
| XM_039807728.1 | mRNA | downstream | 1228 | 20252799 ~ 20255216 (-) | True | bncr |
| XM_039809491.1 | mRNA | downstream | 141060 | 20088128 ~ 20115384 (-) | True | LOC120564471 |
| XM_039809628.1 | mRNA | downstream | 172844 | 20075491 ~ 20083600 (-) | False | si:dkey-29p10.4 |
| XM_039807722.1 | mRNA | upstream | 18100 | 20275877 ~ 20293118 (-) | False | LOC120563518 |
| XM_039807723.1 | mRNA | upstream | 18100 | 20275877 ~ 20292706 (-) | False | LOC120563518 |
| XM_039807724.1 | mRNA | upstream | 18100 | 20275877 ~ 20292582 (-) | False | LOC120563518 |
| XM_039807721.1 | mRNA | upstream | 18100 | 20275877 ~ 20292582 (-) | True | LOC120563518 |
| XM_039809648.1 | mRNA | upstream | 332525 | 20590302 ~ 20596104 (-) | False | LOC120564552 |
| unassigned_transcript_376 | other | downstream | 573527 | 19682846 ~ 19682917 (-) | True | trnap-agg_7 |
| TU116584 | other | downstream | 684522 | 19570302 ~ 19571922 (-) | False | cep152 |
| TU116428 | other | downstream | 867869 | 19387822 ~ 19388575 (-) | True | G86402 |
| TU116306 | other | downstream | 939034 | 19315435 ~ 19317410 (-) | False | arpp19b |
| TU116124 | other | downstream | 1245528 | 19007196 ~ 19010916 (-) | True | G86194 |
| XR_005640056.1 | other | upstream | 549105 | 20806882 ~ 20828603 (-) | False | LOC120564033 |
| TU117029 | other | upstream | 619934 | 20877711 ~ 20879638 (-) | False | LOC120563850 |
| TU117396 | other | upstream | 1455265 | 21713042 ~ 21713554 (-) | True | G87140 |
| TU117418 | other | upstream | 1477229 | 21735006 ~ 21739328 (-) | True | LOC120564778 |
| TU117419 | other | upstream | 1477229 | 21735006 ~ 21739328 (-) | False | LOC120564778 |
