RNA id: XM_039807860.1



Basic Information


Item Value
RNA id XM_039807860.1
length 1012
RNA type mRNA
GC content 0.48
exon number 6
gene id kras
representative False

Chromosome Information


Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 12553483 ~ 12563371 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AGTGCGCCCCGGTATCCGCCCATATTCGCTTAAAGGAGGCCAACCTGAGCAGCTAGGCCGGACGCTCGATCAAATGGAAAGTTCAATCGAATAATTTGCCCACTTTTTCGCATGTTCTCACTTGCTTCTTATACGAGGTAGACCGACTTAAATGCGGGTGTTTCGGTGTGAAATAGGAAATGCAGAGATCGTGTGAAACGAGAGGATTATCAGCTTGACTTATTTGGTCGCTTCTTCGGACGCGGAACTCCACTCGCTAAAAGGTGAATCATGACAGAATATAAGTTGGTAGTGGTGGGAGCTGGTGGCGTTGGCAAGAGCGCACTTACGATTCAGCTCATCCAGAATCACTTTGTGGATGAATATGACCCCACCATTGAGGACTCCTACAGAAAGCAGGTAGTAATCGATGGAGAGACGTGTCTGCTGGACATCCTGGACACTGCAGGTCAGGAGGAGTACAGTGCCATGAGGGATCAGTACATGAGGACCGGGGAGGgctttctctgtgtctttgCCATCAACAACACAAAGTCCTTCGAGGACATTCACCACTATAGAGAACAGATTAAACGAGTGAAGGACTCTGAGGATGTCCCTATGGTGCTGGTGGGGAACAAGTGTGACCTCCCGTCCCGGACAGTGGACACCAAGCAGGCTCAGGACTTAGCGCGCAGCTACGGCATTCCCTTTATCGAGACCTCAGCCAAAACCAGACAGAGAGTGGAAGATGCCTTTTACACTCTGGTACGGGAGATCAGACTGTACCGGCTCAATAAGCTCAGCAAGGAAGAAAAGACTCCGCGCTGTGTCAAGCTTAAAAAGTGTGTTGTGATGTGAAAGGGggtGTTGATGATGCCTTTTACACATTAGTGCGAGAAATCCGGAAGCATAAGGAGAAGATGAGCAAGGAgggcaaaaagaagaaaaagaagtccAAGACAAAGTGTACACTTATGTGAATGACCAGCCCTTTTCAAGacagactaaataaaaaaaaaaaaaactatgt

Function


GO:

id name namespace
GO:0030097 hemopoiesis biological_process
GO:0007507 heart development biological_process
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0048701 embryonic cranial skeleton morphogenesis biological_process
GO:0016020 membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU113270 lncRNA downstream 347977 12205241 ~ 12205531 (-) True G84130
TU113268 lncRNA downstream 352673 12177943 ~ 12200835 (-) True G84129
TU113265 lncRNA downstream 383313 12169668 ~ 12170195 (-) True G84127
TU113253 lncRNA downstream 383861 12160379 ~ 12169647 (-) True G84118
TU113250 lncRNA downstream 390488 12157250 ~ 12163020 (-) True G84115
TU113401 lncRNA upstream 17234 12580603 ~ 12613276 (-) True G84236
TU113414 lncRNA upstream 123665 12687034 ~ 12687287 (-) True G84244
TU113413 lncRNA upstream 124114 12687483 ~ 12688635 (-) True G84243
TU113491 lncRNA upstream 266987 12830356 ~ 12834571 (-) True G84294
TU113522 lncRNA upstream 322294 12885663 ~ 12885917 (-) True G84320
XM_039808778.1 mRNA downstream 295244 12252584 ~ 12258264 (-) True LOC120564089
XM_039809532.1 mRNA downstream 1211139 11265168 ~ 11342369 (-) True cspg4
XM_039809719.1 mRNA downstream 1338015 11205454 ~ 11215493 (-) True snupn
XM_039808176.1 mRNA downstream 1354043 11173553 ~ 11199465 (-) True ptpn9a
XM_039807908.1 mRNA downstream 1385845 11150157 ~ 11167663 (-) False sin3aa
XM_039809860.1 mRNA upstream 21942 12585311 ~ 12587491 (-) True bhlhe41
XM_039809584.1 mRNA upstream 37012 12600381 ~ 12660168 (-) True itpr2
XM_039809588.1 mRNA upstream 126324 12689693 ~ 12712352 (-) False eea1
XM_039809587.1 mRNA upstream 126324 12689693 ~ 12712352 (-) True eea1
XM_039809589.1 mRNA upstream 126324 12689693 ~ 12708403 (-) False eea1
TU113260 other downstream 408962 12141523 ~ 12144546 (-) True G84123
TU113209 other downstream 665110 11888027 ~ 11888398 (-) True G84083
XR_005640086.1 other downstream 1890830 10644032 ~ 10662678 (-) False scamp2
TU112851 other downstream 2121364 10427562 ~ 10432144 (-) True G83826
XR_005640102.1 other downstream 2373511 10174824 ~ 10179997 (-) False tdg.2
TU113814 other upstream 667248 13230617 ~ 13231095 (-) True G84530
TU113910 other upstream 1010462 13573831 ~ 13617896 (-) True mafb
TU114030 other upstream 1467735 14031104 ~ 14033215 (-) False zgc:77752
TU114145 other upstream 1659881 14223250 ~ 14236952 (-) False LOC120564470
TU114408 other upstream 1938591 14501960 ~ 14507201 (-) False LOC120563775

Expression Profile