RNA id: XM_039808308.1


Basic Information

Item Value
RNA id XM_039808308.1
length 3417
RNA type mRNA
GC content 0.45
exon number 12
gene id neto2b
representative True

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 14053952 ~ 14062743 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GCAGACAGATCCTCCGTGTATTTGAGAGGACAAGTCTCAGACTAGTAAGCCACAGACATGAGCTCTGCAACAACTGCGTCCTTGCTCTGAAATATTGACCtcgtctgactttttttttttcattctataATGAAAGACTGATGATGAGTCAGAAGTTCATCAGCTCTTTTTGCCCCAGAAGCTTCTCTCATCTTGACCATTGGTATAAGGATAAAAGGTGAAAGTTGGATTTTGTAACATTCGCTAATCCGTACCATTGACGGAGGGATGTACAGTTGGACAAGTTTGAACTCAAACCCCAGAAAACGGACAGTTGAGAGGATGCATGTAGTGTGGGTATTTATCCTGTTCATTGAGGAGGGATTTGCTCTGGCACAAAAGACTAAAGATGGAGGTGCAGGATCAAAAGGGCTTAGACCCTCTCAGCGGCCGCAGCAATCTCATCACTGTGGAAACTGGGTACGGAACACAGATGGTGGCTCCTTCAGCTCCCCAAACTACCCAAAAACATACCCTCCCAACAAGGAGTGCCTGTACGTACTGGAAGCCTTGCCCCGCCAGAGGATAGAGCTGCTGTTTGATCAGACCTTCTACATCGAAGCGTCATTTGAGTGTCGTTTCGACCACATCGAGGTGAGGGACGGTCCCTTTAGCTTTTCGCCGCTCATCAATCGCTTCTGTGGCTCGGCCAGTCCCGGACTTGTTCACTCTAGCGGCCGCTTCATGTGGATCCGCTTCTTCAGCGATGAAGAGCTGGAGGGGATTGGCTTCCAGGTCCAGTACAGCTTTACTGCAGATCCTGAATTTCATCTGCATGTGGGAGGACTCCTAAACCCCATCCCAGATTGTCAGTTTGAGCTGTCTGGGGCTGACGGCCTGATCCGTTCCAGTCAGGTGGAGGAGGAATATAAAGTGAGGCCAGACCAGGCATTGGACTGCATCTGGACTATACAAGCCCCAACAAACAACAGGATTTACCTGCGATTCTTGGAATACCAGATGGAAAACTCAAATGATTGTAAGAAGAACTTTGTGGCTGTTTATGATGGCAGTAATGCCATTGAGGACCTAAAGGCCAAGTTTTGTAGCACAGTAGCTAATGACGTCATGCTGGACACCGGTGTGGGAGTAGTGAGAATGTGGGCTGATGAGACAAGCCGTCTCAGCCGCTTCCGGATGCTGTTCACTTCTTTTGCAGACCcACCCTGTTCAAGCAGTGCATTCTTTTGCCACAGTAACATGTGCATCAACACCTCTCTTGTGTGCAATGGCATACAAAACTGTGTATTTCCCTGGGATGAAGGCAACTGCAAAGAGAAAAAGAGCAAAAGTTATTTTCACCATATCACAAAGACTCATGGGACAATAATCTGTGTGTCTACGGGTGTGGTGTTACTGCTCCTCATCATCTCCATCCTGGTGCAAGTCAAACAGCCACGAAAGAAGGTGTTGGTACGTAAGAATAACCTGTTCCAACGGGGCGACTTCCAGGAGGTGTTTGACCCTCCACATTATGAACTCTTTACTCTCAGAGACAAGgAGATGTCTGGGGACCTCGGGGAGTTATCAGAGGAACTCCAGTCCCTGCAGGCGTTCAGGAGATCCTCATCAAGCTCACGCTGCATTCACGAACATCACTGTGGCTCTCAGGCTTCTGTCAACTCTATTAAAGCCAGTCAAGTTGAACATGGCATGGGTAGGGGATCCATGGAGCTTCCCCCTTTCAGAGGGAACTTCCAAAGCGTCTTACCTCCCATCAGGGACTTGAACAGCAGTATGCGGAAGAAGAGCTGGCCTAGTATGAAACCAGGCCGGATGCAAGGTCATCATGGTATGGGGGATAGAGCGTTGGGGAGGCAGGATAGAGTGATggaagaggatgaagaggaggacgaAGATGGAAGGTATGATGTGTATGTACGCAGAGCAGGAAGCCGAAGAGGGAACTATGAAATGGCCCAGCAAAGATCCTTGTCCATGGActtctgaaaagaaaagacaaggtTGGCACTGTAACTACTTTGGGGGCAGAACTCTGCACATTTATAGAAGAGGGGAGACATTTTAACACCACAGGGCGGATGTGTCTCACTTACCTTCTTTATATTAATAATGATTAAAAAGAAGCAATCCAGGACTTCTTTTCCTTCACTTGCCTCATTTACAGTGAGGTTGGGAAACACAGGGTCTGTTACAGAGCGCTGCCGACTCTGCCCAGACACTGACAGCTGACAGGGAGCTGCTATTGTATTTGTGATCAGTGTAAAGTGAAGACAGATGATAATGCTGTGTATTGTTcttgttgtatttttctaaatacattttactatgAAGGTAATAGATTTTGTTGAAATATGTTTTCAATCAGTGTTTAGGTTCTGAAAGAATGTTTTAAGAGGAAGTGTGATTACGGTACATTTAAAGCAAACAATGTAAAAGTCAACTCTCAGTTCTGTGATTACCTGTATTTAAGAATAAATATgtacatttctgcaccactggTTAAGGAAAAGTATCAACTTGCCTTTGATATAGAGTCAGTTATAACAACAGATATAAAATGACCATCAACAGTCAGGCTGTCACAGTGTTCCTTCCCAGGAGAaaggtgtgtgtgaatgtgtgtgtgcgtgcatgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttcagaaaTCTTCTAGAGGGTGAGCTACAGGTGTGCCCTTATAAAGTTATATAACCACAAAAAGCCCCAAACTGTTTGCCATTTACAGCCTATCCTTAAACCTTatgtttcattttcttttttggctgTAGACACTGATTATAATCGATGTGTGTCAACTTGTCTAGAGAAAAACTACACACCATCTTACGATGAGAACAGAACAGCCGCAACAACAAATCGGGCCAGGGGCGTAGAGTGGAGTGGCAATGGACCCTTTCCTACTCCCCCTACTTCCACACCCACATTCAAACACTGccttcattttgatctcaactacacacctgtaaagtttTGTGACTGCATCTTGCAAGGTTGTAACGCCATCACAGTGACAGAATCTatccacagacagacagtcagaccgTCAGTAATAGAAACACCTGGCACCTATACACAAAATCGTCTCTGTGGTTGTTCCCGCTACAGTAAAAATCTCAGGACCACATTTTGACATGATGACACACACCCAAGGTCTTGcggctcttaaaaaaaaaagggtgtgaGTGCTAGGAACTGCTTAGAGATCAGTCTCTGGTACGTTTTTACTCATAATATAGGACCACAAATGAGCATGTGCACACTGTAGACCTTCAACAGATGGCTGTAGACTGCTTTGTAAATGTTGTATCCCAATGATGATGAGAATCAGATAATGTGAAAATGATTTATACACTGTAATCAGAATACACaattgctttat

Function

GO: NA

KEGG:

id description
K24360 NETO; neuropilin and tolloid-like protein

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU113923 lncRNA downstream 368483 13683824 ~ 13685469 (-) True G84597
TU113916 lncRNA downstream 409104 13644417 ~ 13644848 (-) True G84592
TU113907 lncRNA downstream 609340 13434739 ~ 13444612 (-) True G84585
TU113867 lncRNA downstream 668747 13325986 ~ 13385205 (-) False LOC120564547
TU113827 lncRNA downstream 729779 13322182 ~ 13324173 (-) False G84536
TU114089 lncRNA upstream 9890 14072633 ~ 14072948 (-) True G84719
XR_005640108.1 lncRNA upstream 160454 14223197 ~ 14232530 (-) False LOC120564470
TU114136 lncRNA upstream 160507 14223250 ~ 14236952 (-) True LOC120564470
TU114142 lncRNA upstream 160507 14223250 ~ 14236952 (-) False LOC120564470
TU114147 lncRNA upstream 174839 14237582 ~ 14238451 (-) True G84751
XM_039808313.1 mRNA downstream 7634 14039429 ~ 14046318 (-) True LOC120563866
XM_039807392.1 mRNA downstream 16236 14031108 ~ 14037716 (-) True zgc:77752
XM_039809212.1 mRNA downstream 22957 14027898 ~ 14030995 (-) True odf3b
XM_039810069.1 mRNA downstream 26888 14022047 ~ 14027064 (-) True rabl2
XM_039808549.1 mRNA downstream 268201 13781377 ~ 13785751 (-) True arsa
XM_039809703.1 mRNA upstream 16433 14079176 ~ 14090593 (-) False terb1
XM_039809704.1 mRNA upstream 17534 14080277 ~ 14090593 (-) True terb1
XM_039809705.1 mRNA upstream 17926 14080669 ~ 14090593 (-) False terb1
XM_039809479.1 mRNA upstream 47723 14110466 ~ 14198123 (-) False frmd4a
XM_039809470.1 mRNA upstream 47723 14110466 ~ 14184687 (-) False frmd4a
TU114030 other downstream 20737 14031104 ~ 14033215 (-) False zgc:77752
TU113910 other downstream 436056 13573831 ~ 13617896 (-) True mafb
TU113814 other downstream 822857 13230617 ~ 13231095 (-) True G84530
TU113260 other downstream 1909406 12141523 ~ 12144546 (-) True G84123
TU113209 other downstream 2165554 11888027 ~ 11888398 (-) True G84083
TU114145 other upstream 160507 14223250 ~ 14236952 (-) False LOC120564470
TU114408 other upstream 439217 14501960 ~ 14507201 (-) False LOC120563775
TU114449 other upstream 903712 14966455 ~ 14967447 (-) False si:ch1073-390k14.1
TU114482 other upstream 1003296 15066039 ~ 15073350 (-) True G85014
TU114636 other upstream 1416239 15478982 ~ 15483926 (-) True ttc23

Expression Profile