Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039808373.1 |
| length | 1288 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 10 |
| gene id | tpm1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053119.1 |
| NCBI id | CM020916.1 |
| chromosome length | 42187026 |
| location | 16968593 ~ 16981538 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0005856 | cytoskeleton | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0003779 | actin binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU115120 | lncRNA | downstream | 49937 | 16920449 ~ 16922142 (-) | True | G85481 |
| TU115099 | lncRNA | downstream | 69758 | 16901164 ~ 16902321 (-) | True | G85462 |
| TU115097 | lncRNA | downstream | 72284 | 16897684 ~ 16899795 (-) | True | G85460 |
| TU115089 | lncRNA | downstream | 102916 | 16867127 ~ 16869163 (-) | True | G85453 |
| TU115073 | lncRNA | downstream | 155932 | 16811074 ~ 16816147 (-) | True | G85441 |
| XR_005639950.1 | lncRNA | upstream | 108577 | 17090105 ~ 17095744 (-) | True | LOC120563415 |
| TU115172 | lncRNA | upstream | 113809 | 17095337 ~ 17095763 (-) | False | LOC120563415 |
| TU115304 | lncRNA | upstream | 534375 | 17515903 ~ 17517167 (-) | True | G85601 |
| TU115305 | lncRNA | upstream | 534690 | 17516218 ~ 17517167 (-) | False | G85601 |
| TU115317 | lncRNA | upstream | 562627 | 17544155 ~ 17544405 (-) | True | G85613 |
| XM_039808237.1 | mRNA | downstream | 4982 | 16963477 ~ 16967097 (-) | True | lactb |
| XM_039808238.1 | mRNA | downstream | 4985 | 16963477 ~ 16967094 (-) | False | lactb |
| XM_039808234.1 | mRNA | downstream | 13662 | 16928741 ~ 16958417 (-) | False | tmem266 |
| XM_039808235.1 | mRNA | downstream | 34467 | 16928741 ~ 16937612 (-) | True | tmem266 |
| XM_039808216.1 | mRNA | downstream | 53806 | 16913537 ~ 16918273 (-) | True | isl2a |
| XM_039808505.1 | mRNA | upstream | 12395 | 16993923 ~ 17075416 (-) | False | tln2b |
| XM_039808504.1 | mRNA | upstream | 12395 | 16993923 ~ 17075416 (-) | False | tln2b |
| XM_039808503.1 | mRNA | upstream | 12395 | 16993923 ~ 17075416 (-) | False | tln2b |
| XM_039808502.1 | mRNA | upstream | 12395 | 16993923 ~ 17075416 (-) | False | tln2b |
| XM_039808498.1 | mRNA | upstream | 12395 | 16993923 ~ 17075416 (-) | True | tln2b |
| TU115062 | other | downstream | 163663 | 16808056 ~ 16808416 (-) | True | G85435 |
| unassigned_transcript_374 | other | downstream | 207293 | 16764715 ~ 16764786 (-) | True | trnah-gug_10 |
| TU114908 | other | downstream | 531114 | 16439374 ~ 16440965 (-) | True | G85321 |
| TU114652 | other | downstream | 1427997 | 15514778 ~ 15544082 (-) | True | G85133 |
| TU114636 | other | downstream | 1488153 | 15478982 ~ 15483926 (-) | True | ttc23 |
| unassigned_transcript_375 | other | upstream | 945519 | 17927047 ~ 17927118 (-) | True | trnaq-cug_6 |
| TU115583 | other | upstream | 1049480 | 18031008 ~ 18036276 (-) | True | G85813 |
| TU115584 | other | upstream | 1049480 | 18031008 ~ 18036276 (-) | False | G85813 |
| TU115585 | other | upstream | 1049480 | 18031008 ~ 18036276 (-) | False | G85813 |
| XR_005640154.1 | other | upstream | 1049661 | 18031189 ~ 18031256 (-) | True | LOC120564816 |
