RNA id: XM_039808808.1


Basic Information

Item Value
RNA id XM_039808808.1
length 3671
RNA type mRNA
GC content 0.54
exon number 24
gene id osbpl5
representative False

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 26587150 ~ 26652111 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gcagcagcagcagccgccagATGAACGGTCCGCAGCAGGAGGATCCAGTCCGCTCCACACTCTCCATGTTGAAACGGAGCAACTTCTCCTCCAGCCGACTCCTACCGGCCACCACTGCCCGCCTGCTGCTCCCCTCAGCCCAGCTATCTCACACAGTCCCGTGCTATGAAGCTGGACTGGAAAAGAAGCTCGGACACAACTGTATGAGCAGCACGCTGGTCGACACAGAGTGAGACACGTTGCTCCAACAAAGGCTTCTGGATGCAGTGTCTCCCGCGGCTCAGGTGAAAGgtcacggcagtttcctgtggcgtcgctatgacgaccagccagcGCTCCTCTCACGCATGAGgaggtactaaatctgcaatggaaaaaggaggacaggGCACCGCGGCCGAGCCGAGCCGCGTAGAGCTgatactagcagtggAGGACGAGCAGGTTGTCAGGATGAAGGAGGAGAATTTGTTCCATCGGAGGTTTTCTCTGTGCCCCAACGCCACCTCCCCACCCAAAATTGACCCCCGCACTCTCACCCGGAACATGTCTTATGGAGGAGAAGACGAGCTCTACAACCTCAGCCCAGGCAGTGACACAGACAGGAACGGTCTCTCCATGCTGAGTAATGAACTTAGTCCTGCCCAATCACCAGGCAGCAAGtcTGAGTCCAGGATGTTTAATGGTGTTGAGAAGGACTGCTCCTCCCCCACAGAGAAGCTGGCCCGGAAGGAGTCTCTCAAGGTCCAAAAGCAGAATTACAGGCAAGAGAAGAAACGGGCAGCTAAAGAACTGTTTAGCGCACTAAAGGATCCCAGTGTTGTCATTATGTCCAACTGGCTAAAGATCCGTGGCTCTTTGAAGAGTTGGACCAAGCTTTGGTGTGCCCTGAAGCCTGGAGTCCTTTTGATCTATAAGACCCCCAAAGTGGACCACTGGGTGGGAACCATCCTGCTCAGCGCATGCAAGCTGATTGAGAGACCCTCCAAAAAGGATGGCTTCTGCTTCAAGCTCTACCACCCACTGGACAAATCCATCTGGGCTGTCAAGGGTCCCAAAGGAGAGAACGTCGGCTCCATCACGCAGCCTCTACCCAGCAACTACCTGATCTTCAGAGCAGCGTCTGAGTCTGACGGGCGGTGCTGGATGGATGCCTTGGAGCTGGCTCTCAGCTGCTCCAGTCTCTCCAAGCTGACACCCAAAGGTGGGAAAGAAGGAGACATCAGCACGTCTTCAGAGTCCTCCCATATCCTCCACCTGCTGCAGTCTACTGCGCTCACTGATGCGGAGCTGCTACAGTTAAATGACACTGTGCTGCTCGGCAATCACCACATGGAGCATGACGGCTTTTCAGACAAATCGGAGCGCGAGGCTCATGATGACTGGGACACTACAGCCAATGAGAACGGTGGAAGGCTAACAGAGGAGAGCGACATGGACCAATCGGACGACCTGTCCCCCGGGCCACAGGCCACAGCCTATGTAGAGCAGAGCACAGAGGAGATGGCTGAGGCTGGGGAAGCCTCCCAGGTGGAGACTGTCTCAGAGGAGAACAAGGGTCTGATCTGGAGCCTGCTGAAGCAGCTGCGGCCGGGCATGGACCTGTCCAAAGTGGTTCTGCCCACCTTCATCCTGGAGCCTCGCTCTTTCCTGGACAAGCTGTCTGACTACTACTACCACGCTGATCTGCTCTCACAAGCTGCACTGGAGGTGAGTGCATACGGTCGGATCAAGcaggtgttgagatggtactTGTCTGGCTTCTACAAGAAGCCTAAGGGTCTGAAGAAGCCTTACAACCCAATCCTGGGGGAAAGGTTTCGCTGCTGCTGGCTTCATCCTCAAACCGACAGCTGCACTTTCTACATAGCGGAACAGGTGTCACACCATCCGCCCATCTCTGCCTTTTATGTCTGCAATAGGAAGGATGGTTTTTCTATCAGTGGAAGCATCCTGGCCAAATCCAAGTTCTATGGTAACTCTCTGTCAGCTATTCTGGATGGCAAAGCCAGACTGCTCTTCCTTGGCAGGGATGAGGAGTATGTCATCACCATGCCGTACGCTCACTGCAAAGGTATCCTGTACGGGACTATGACACTAGAGCTGGGTGGGAAGGTTACCATTGAGTGTGAGAAAACCAAATGTTTCACAGAGCTGGAGTTTAAACTCAAGCCTTTCCTTGGAGGCTCCTGCTCTGTGAATCAGATCAGCGGGAAGATCTTTGCTGGAGAGGAGCTCCTGGCCACCGTTGATGGACACTGGGACAACGAGGTGTTCATTCATGAGAAGCGCTCGGGCCAGCAGGAGACGTTGTGGAACCCGACCTCAGACATTCGTAGCAGCCGCCTCAAAAGACAAGTGGTCCAAACAGACCAGCAGGGAGAGTTTGAGTCTGAAAGACTGTGGCAGCATGTGACCAGTGCCATCATGGACCGGGACCAGCTGCGGGCCACCCAGGAGAAGTTTGTGCTGGAGGAAGCTCAGCGGGCAGAGGCcagggagagaggagacaaaCCCTGGACCTCCCCACTTTTCCATCAGGACCCAGTCACCTGCGAGTGGACCTACAGGCATATGGACACGCGGCCGTGGGACCCTGAGCGCTGTCTAGTTCAGTTTGAGAAGGATGGAGTGGTTCAGACGCACGAGAAAAGCCAGAGGCAACACAACGGACTCTCCTACAGCCACAGCTGGGCCAGCCAACAAAAGGCTGAGATGAATGGGAAACGAAGAAAGGCCAGTAGCCAGCCGTCCAGCTGCAGCCAGAACACTGAGAGCAGCAGCACCACACCAGAACCCACACACGAGTCCTCAGACAATGAagGGTTCTCAAACCAGTGTGCACGGTGCAATAAAGAGGTGAAGGACATCGCCCTGATGGAGGCCTccatcacatccatacagaagACACAGCAGGACATCCAGCGGAACCTGGCGGCTCTGAGTCGTCAGCTGACTCGTCAGAGGGCGACGGACGACGGCGTGTCGCTAACAGGCCGTCACTGTCTCATCCTCTGCGTCCTGCTCCTCTTCCAGCTCCTCCTCAACTACGTCTTCACCTGAGCCCGCTCCTCAGGGAGGAGTTTTCCCTCCGGCACTGATCTGGCATCAGAtccctccccaaaaaaaaaaaaagacaaaaaaaaaaaagcacagactCCAATCAGCAGATTAGGGCAGAGACCTCAGATCAGTGTTTGGAGGGCAACTTCATCCCTTTGTTTCTTCTGAGAGGGGAGGAGCACTGGACATTAAAGCAATAAACACAGCCACAGCCACAGCCTGTCAGTCATCTGCAGAGAGGAACAGCACCACCTAGTGTAGCCAGACTGAATCAGCGCCGGCACCCACGCACTTTGGACAGGAAAGGAGAGATGAGAGACGAGCATGGCTAAAAAGATTTTgaataaaaagatgaaatgtatgatgaagaatgattttacaaaaaaaagaaatgacaaagaGGATGTTTCACCATTCCTAAGTATCTTTTTATATTGCCCTGcaatactgtatatctgtcaGTGTGCCTGCCTTTATGTGTGTTGTTCGTACCTACAGTACAGTAGGCCCCAAGGGTGCAGGCAGATCTCCGCTTGGACTTCTCCtactcccctttctctccagATTTGGGCCTTAACGctgaagccaaaaaaaaaaaaaaaaaaaaa

Function

GO:

id name namespace
GO:0006869 lipid transport biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU118655 lncRNA downstream 22564 26478742 ~ 26564586 (-) True G88096
TU118668 lncRNA downstream 37464 26547774 ~ 26549686 (-) True G88106
TU118660 lncRNA downstream 45138 26537908 ~ 26542012 (-) True G88101
TU118622 lncRNA downstream 192198 26394324 ~ 26394952 (-) True G88067
TU118600 lncRNA downstream 285130 26299574 ~ 26302020 (-) True G88054
TU118738 lncRNA upstream 118299 26770410 ~ 26771392 (-) True G88163
TU118745 lncRNA upstream 141402 26793513 ~ 26793768 (-) True G88170
TU118804 lncRNA upstream 210667 26862778 ~ 26863804 (-) True G88209
XR_005639981.1 lncRNA upstream 348830 27000941 ~ 27001458 (-) True LOC120563588
TU118857 lncRNA upstream 350843 27002954 ~ 27003506 (-) False G88245
XM_039807445.1 mRNA downstream 74622 26505100 ~ 26512528 (-) True th
XM_039809058.1 mRNA downstream 83912 26495182 ~ 26503238 (-) True igf2b
XM_039807572.1 mRNA downstream 259776 26303366 ~ 26327374 (-) True si:ch211-236l14.4
XM_039809327.1 mRNA downstream 320132 26243947 ~ 26267018 (-) True si:dkeyp-19e1.3
XM_039809326.1 mRNA downstream 324566 26243946 ~ 26262584 (-) False si:dkeyp-19e1.3
XM_039809282.1 mRNA upstream 1525 26653636 ~ 26692244 (-) False ptprjb.1
XM_039809280.1 mRNA upstream 1525 26653636 ~ 26692244 (-) False ptprjb.1
XM_039809277.1 mRNA upstream 1525 26653636 ~ 26692244 (-) False ptprjb.1
XM_039809275.1 mRNA upstream 1525 26653636 ~ 26692244 (-) False ptprjb.1
XM_039809278.1 mRNA upstream 1525 26653636 ~ 26692244 (-) False ptprjb.1
TU118402 other downstream 990389 25596353 ~ 25596761 (-) True G87897
TU118279 other downstream 1521662 25064752 ~ 25065488 (-) True G87803
XR_005640032.1 other downstream 2670948 23909169 ~ 23916202 (-) False LOC120563922
TU118702 other upstream 21732 26673843 ~ 26674883 (-) False ptprjb.1
TU118864 other upstream 361126 27013237 ~ 27014411 (-) True G88249
TU118971 other upstream 571941 27224052 ~ 27228966 (-) False zgc:153031
TU119050 other upstream 702861 27354972 ~ 27355776 (-) True G88379
TU120007 other upstream 4069997 30722108 ~ 30722503 (-) True G89085

Expression Profile