RNA id: XM_039809058.1


Basic Information

Item Value
RNA id XM_039809058.1
length 4049
RNA type mRNA
GC content 0.43
exon number 4
gene id igf2b
representative True

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 26495182 ~ 26503238 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CTTTGGGACAGCCTTCACACATCATCTCATATATCCGCACCAACTGGGAAATTAACTCACCTGCAATCTCTACAACCAAATAACCCCCCTCCCCGACCCCCCCCCCAACGTTTTGACTACTGCCAACTGACATGGAGATCCAGCAAAGACACGGACACCACTCACTTTGCCACACCTGCCGGAGAACGGAGAGCAGCAGAATGAAGgTCAAGAAGATGTCTTCGTCCAGTCGCGCGCTGCTGTTTGCACTGTCCCTCGCGCTCTACGCTGTGGAAATAGCCTCGGCGGAGACGCTGTGTGGGGGAGAGCTGGTGGATGCGCTGCAGTTTGTCTGTGAAGACAGAGGCTTCTATTTCAGTAGGCCAACCAGCAGGGGTAACAACCGGCGCAACCAGAACCGTGGGATCGTAGAGGAGTGTTGTTTCCGTAGCTGTGACCTCAACCTGCTGGAGCAGTACTGTGCCAAACCCGCCAAGTCCGAAAGGGACGTGTCGGCCACCTCTCTGCAGGTCATACCCGTGATGCCCGCATTAAAACAGGAAGTCCCAAGGAAGCATGTGACCGTGAAGTATTCCAAATACGAGGTGTGGCAGAGGAAAGCGGCCCAGCGGCTCCGAAGGGGTGTCCCCGCCATCCTGAGGGCCAAAAAGTTTCGGAGGCAGGCGGAGAAAATCAAAGCCCAGGAGCAGGCAGTCTTCCACAGGCCCCTGATCAGCCTGCCTAGCAAACTGCCTCCTGTCTTGCTCGCCACGGACAACTATGTCAACCACAAATGAGCCCGCTGCCAGCCCTTTGCACAGACAAGAGTttggagggagaaaaaaaagactagGGGATTATAGCTTTGTCTCTGACGTCATTTCTGTGGCAGTCCTCTTTGACCTCCCCTGCCCTGTCCGAGCCCACCaacaatccccccccccctccccttctctcATCCACTACTTCTTGACCCCCTGGCCCTTTTCTTATGCCCCCCTcaaccccacccacccaccctccTCCGGCACACAAACATGCCTTCACATTCTTCCTGTCTGAACTCTTTagctccctctctttttcagtCACTGACACAAAGGCACAACACAAACGATGAACAAAAAGTTAACAATTCGGCTGAATGCAATTCAGGTGGATCCTTAAGCAAAAGAGAAAAGGGAAGGGAGAAAAGAAGATGAAAGAGATCTGTGGTTTGCAAGTGTCAAGAGGACACCCAgcggaatgttttttttttgtccttttggaAGACAACTGAAAGTGAAGAGCAGCTTGCATGAAATAATCCATTCCACATCATTTTTCCTGAggcaaaaagaaaatctctgtTAGTTCTTTTTCTTATTAGTTTGCACCTTTACCTATAAAGGGACTTCCACACTGTAAGGAATTATTTTGTAAAATTAGATTCCTGTTCCAGCACCTTTTGATCACaaacaaaaagcagaaaagagTCTGCAAAATTGCACATTGCCACGGATTACgtcaaagtaaagaaaaaaatggcaCTATTTTTTTATGAACAATGAACGTGTagcttaaaaaaatgtcatggtgCTAGCTTTGGGAATGGACTCAAAGAAGAGGTTGAAAAGCACGTTTTTTCTTTGAATGAATATTAAAACTTTCCGTTTTAAGGAAAGTGTGACTTTTGAAAAAAGGAAGATAAAGGATATGGGGGAGCTCCTGGCAGTGGCAATGTAAAGGGGGAAGTGTCACTGAGAAAAATATGGGCTGTGTCGGCATCTAGGCTCACAGCGAGTGCTAGCGGCTGCTCATCAATAGCTTGCCAGCATTAGCGGCAAGGGGGACCTGAGACCCAGTCCCTGTTCTTCCTGTCCCTGCCAGACACAGGGAGCAGTGtgaggacaaatatgggacacCGTGGACCGCCTGGATTGAGACAGTACTACAGTTCTGGGACTTCCTGTTTGCTATGGCTTTGCAGACTGCTCTGACAGGAAGTAACATGGCATGGACAAAGAGCAAGTGGGATAATGatgattatattttattttgtcttttttttctgttttcttttcatatcaatgtttcaatgaaaaaaaggaaaaccccGTCAGTTTCTGGTACCGTGACATTCCTGTTTTTCCAAGTTaggcttttatttttgtttccatgGTTATTGTTGTGATGTTATTTTACAGTTCTAATGGCACAAAATTTCAATtcaaagggaaaaaaacagcaataatGTCAActaacattttattgttattgtatatCAGTAGTATTCACATGCTTTTGCCTGAAAACAAATacttgaatatatatatatatatacatctctatatatatatatagatatataattAGTTTCCAGGGACGTTGTGTTATTTTCCTTTAGTCTGAGCTGTATCTTGCGTAATGAGCCGCCaagcttttttgtttgtttgttgaaaTACAAATAAGGGCACTGTATAAAggcattatttattttgttataaaatatatttgaaaaattGGTCCAAATAATATACGTAGCACTGATGCTCAACTGACGGATTTATTTTGTATGATCTCTGTTTTCCAATTGGAGTTGTAAGGCTTTTTGTAGATGCTTTGTACCAaaaataatgtcttttttttcttttttcgttTGCCATAGTTactttaaattaatattttaacaGCAGCATAGCCTGGATTGCTTAGGCATGTTATGTCACAGAAATAGGCACATACTCTGAATACGTTGGTCTGCATGGATTTCCAGAAGCCTGTCAGGGGTTATCTGtgaaaagaaaagcatcaaggagtgactttattcttggaAAAATAACTGTTCAACAGTGATTGTACTCAAACCCACTATGTTTTGAAGCCACTTTAGTATTGATGGCAGGAGAATGATCATCCTTCATTAAACCATGTCTTTGGAATTGTGCATGGTGTTCTATGATCTTCTAAGGAGCATGCCTGTGTGCCAGTGCCACTGATGTTGTCGCGCATTGGTTTGGGTCATGAGGCCATAACTGTCCGGTCAGTTGTAGATTTTAGGGTTTAGCTTAAATGTGACTTTCACAAGTCATTGTGTCGATGCCTTAATTGGAGGTAATGATGTTGCTATGATGCTAGTAACCTTCAAAGGTCATTGTCTATTAAGGAGAGCTTATCATCGCTCAACACCTcactatctatctgtctgtctgtctgcccttTCTTCTCTGTTTGTAAAAGACAATGCCCCTGATCTTATGCATCAACAGTATGTATCTGCATTCGCATGGCAAGGAGGTGGGGGGTTGCTAGCCTGCCATTCACCCCTCAACAATCTTCCAGTCATCTATCCATAATGCATTTGATGAAGGGCTATCACGCTAAAACCATTTCTGAAGcactcaggaaaaaaaaaaaatctgtgctCTCCAAGGGAGAAGGGCAGGGTGTCAGTGCTAATCCTGTTGTGGAAAGGCAGCTGAGGTTGTTGCCCATACCTGGCCACAATGATACAGCTCtttgtgacaaaaccactgaagCCCATGTCAGAAACAAGGTCATTCTGTGCCACATTATAgtttcctcctccactgtgtCATGCGTCACCCATGAAATGGAGACTTAATGGATACTCGCCCGACTGTAGTGAAGAGTCAAGCCAATACGTTATATCTTCTGTCAGAGAGATCTCAATTATCAAGGCTGCGTCCTGTCTCTAATTATATTCTACTTCAGTTGTGCAACAAAGCAGGCAGtgcaattattattatattattattattattgataaaattattattatattttctattttattcaatattttcCTGCTAGGACTGCATTCATTCACTATTGTAATGTTCAAACAGGCTACTCTAGTGTTCTTATGAATGGCGTGAAAGACAACCACTTCTTTTCGCTGAATATGAAGAGATACCTTGCCGAGCAATGGCAACTTTTTCTGTGTCAGTAGCTCACTCAgcctgtgtgtattttattgatttaaccTCTGCACGCTAGAACGTCCGAAATGCACAATTCATGTACTTTCATTTttaatatcaataaaaaaaaacattttatcaaACATA

Function

GO: NA

KEGG:

id description
K13769 IGF2; insulin-like growth factor 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU118622 lncRNA downstream 100230 26394324 ~ 26394952 (-) True G88067
TU118600 lncRNA downstream 193162 26299574 ~ 26302020 (-) True G88054
TU118599 lncRNA downstream 194074 26299574 ~ 26301108 (-) False G88054
TU118587 lncRNA downstream 209745 26280458 ~ 26285437 (-) True G88042
TU118570 lncRNA downstream 251562 26242641 ~ 26243620 (-) True G88030
TU118660 lncRNA upstream 34670 26537908 ~ 26542012 (-) True G88101
TU118668 lncRNA upstream 44536 26547774 ~ 26549686 (-) True G88106
TU118738 lncRNA upstream 267172 26770410 ~ 26771392 (-) True G88163
TU118745 lncRNA upstream 290275 26793513 ~ 26793768 (-) True G88170
TU118804 lncRNA upstream 359540 26862778 ~ 26863804 (-) True G88209
XM_039807572.1 mRNA downstream 167808 26303366 ~ 26327374 (-) True si:ch211-236l14.4
XM_039809327.1 mRNA downstream 228164 26243947 ~ 26267018 (-) True si:dkeyp-19e1.3
XM_039809326.1 mRNA downstream 232598 26243946 ~ 26262584 (-) False si:dkeyp-19e1.3
XM_039807654.1 mRNA downstream 268385 26209845 ~ 26226797 (-) True tmem86a
XM_039807651.1 mRNA downstream 305176 26032415 ~ 26190006 (-) True b4galnt4a
XM_039807445.1 mRNA upstream 1862 26505100 ~ 26512528 (-) True th
XM_039808813.1 mRNA upstream 83912 26587150 ~ 26652111 (-) False osbpl5
XM_039808809.1 mRNA upstream 83912 26587150 ~ 26652111 (-) False osbpl5
XM_039808808.1 mRNA upstream 83912 26587150 ~ 26652111 (-) False osbpl5
XM_039808810.1 mRNA upstream 83912 26587150 ~ 26652111 (-) True osbpl5
TU118402 other downstream 898421 25596353 ~ 25596761 (-) True G87897
TU118279 other downstream 1429694 25064752 ~ 25065488 (-) True G87803
XR_005640032.1 other downstream 2578980 23909169 ~ 23916202 (-) False LOC120563922
TU118702 other upstream 170605 26673843 ~ 26674883 (-) False ptprjb.1
TU118864 other upstream 509999 27013237 ~ 27014411 (-) True G88249
TU118971 other upstream 720814 27224052 ~ 27228966 (-) False zgc:153031
TU119050 other upstream 851734 27354972 ~ 27355776 (-) True G88379
TU120007 other upstream 4218870 30722108 ~ 30722503 (-) True G89085

Expression Profile