RNA id: XM_039809212.1



Basic Information


Item Value
RNA id XM_039809212.1
length 1403
RNA type mRNA
GC content 0.47
exon number 7
gene id odf3b
representative True

Chromosome Information


Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 14027898 ~ 14030995 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CGTTGTCATAGTGAAGTTGACAAGCATTAAACAATCTGTGTCTGGGTTCAGTGCACATGCTGAGTTCCGGGGATCTGACACTCACAGAAGGATCAGCATATATATGAGGGTGATGTCAAAGGCCGAAGCTTGGGTTGGGACCTGGAGGCCTCACAAGCCAAGAGGGCCCATTGCTGCACTCTATGGCAGTCCAGGGCCCAAGTATGCACTGCCTGGACTCACAGGTATTGCTAAACATGACCCTACTAAATACAAAGCACCAATGTTCAGCTTTGGGGCACGTCATACTCACAAGTCCGAGAGCTCCCCTGGACCAAGCTACCTAATCCCCTCCAACATCACCAGAGTGGGCCGAGACGGCGCTCCTGCATTTTCCCTCTACAGCCGTCCAAGGGAGCCACAGTTGTTCCAGGCCCCTGGACCAGGTAAATACTCACCAGAACATTCCGGGAAGTCCGTCTTCCAGTCTGCTCCTGCTTATTCTCTGTCTGGGAGGACCAAAGACCTCAGCATTAACAATACACCAGGCCCAGCCTCCTACTCTCTGCCCCCAGTCCTGGGGCACAACACTGTGGCCACATCTGCAGCTCCCACCTTCTCATTCTGTGGCCGCAGCAAAAATGGAAGCTTCCATGAGGACCTGAAGAAGACTCCTGGCCCTGCTGCCTACAAAGTTGTGGATCCTTGTACTTACAGCCAAAAATCTCCCCGGTTTAGCATGACAGGCCGCAACTTCCCACCTGGTGAAACCACAAAGAAGCCAGGGCCTGGTGCACACTATCCTGAGCAGgtGACCTTCACAAGAGCAAAAGCTCCCAGCTTCTCGTTTGGACTGCGTCACTCAGAATACATCTCACCCCTCATTGTAGATGTGCCTGAATAATGTCACATGTGCTCGCTTGTATTAATTGGGAATTCACACAGCATAAAGCACAAAGAGCACAATAAAGCACAAAAAGCAAACTGCTCAGGATTATTGAGATCAGATTTTATTGCCGCAGTTATAGGCCATATTGTATTAGCACTTGGCACTTTGCCAGGGTTATTATGACCACTATCAGTATTTAAAGTAAATTATACTGGAATTATACTCATTAGTGGCATGTCTGCCATTTGTATTAATGcaacaagattaaaaaaagtattttagaCCAATTTTATTTTTCACGGTATTAGTTGTTGGTTTAGTATTTTGATTGGTTAAGTAACAGTACAGTCAGTACTTTCTGCAGTATCAATTATAATTGGGCATGCCATGACAGCAACAGCACATGTGttaataataacataaaagATGGCTCCATTCCGTTTAGGTGCCCCATGTCAGGGAGCCAGTCGGCACGGTACAGCAAGGCTGTAGTACATTCAATGGAATAAAGCAAGGATTAATGCTATTAGATACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU113923 lncRNA downstream 342429 13683824 ~ 13685469 (-) True G84597
TU113916 lncRNA downstream 383050 13644417 ~ 13644848 (-) True G84592
TU113907 lncRNA downstream 583286 13434739 ~ 13444612 (-) True G84585
TU113867 lncRNA downstream 642693 13325986 ~ 13385205 (-) False LOC120564547
TU113827 lncRNA downstream 703725 13322182 ~ 13324173 (-) False G84536
TU114089 lncRNA upstream 41638 14072633 ~ 14072948 (-) True G84719
XR_005640108.1 lncRNA upstream 192202 14223197 ~ 14232530 (-) False LOC120564470
TU114136 lncRNA upstream 192255 14223250 ~ 14236952 (-) True LOC120564470
TU114142 lncRNA upstream 192255 14223250 ~ 14236952 (-) False LOC120564470
TU114147 lncRNA upstream 206587 14237582 ~ 14238451 (-) True G84751
XM_039810069.1 mRNA downstream 834 14022047 ~ 14027064 (-) True rabl2
XM_039808550.1 mRNA downstream 242147 13781377 ~ 13785751 (-) False arsa
XM_039808549.1 mRNA downstream 242147 13781377 ~ 13785751 (-) True arsa
XM_039808551.1 mRNA downstream 266565 13758290 ~ 13761333 (-) True LOC120563982
XM_039807983.1 mRNA downstream 287798 13727188 ~ 13740100 (-) False chkb
XM_039807392.1 mRNA upstream 113 14031108 ~ 14037716 (-) True zgc:77752
XM_039808313.1 mRNA upstream 8434 14039429 ~ 14046318 (-) True LOC120563866
XM_039808309.1 mRNA upstream 22957 14053952 ~ 14062743 (-) False neto2b
XM_039808308.1 mRNA upstream 22957 14053952 ~ 14062743 (-) True neto2b
XM_039808310.1 mRNA upstream 22957 14053952 ~ 14062493 (-) False neto2b
TU113910 other downstream 410002 13573831 ~ 13617896 (-) True mafb
TU113814 other downstream 796803 13230617 ~ 13231095 (-) True G84530
TU113260 other downstream 1883352 12141523 ~ 12144546 (-) True G84123
TU113209 other downstream 2139500 11888027 ~ 11888398 (-) True G84083
XR_005640086.1 other downstream 3365220 10644032 ~ 10662678 (-) False scamp2
TU114030 other upstream 109 14031104 ~ 14033215 (-) False zgc:77752
TU114145 other upstream 192255 14223250 ~ 14236952 (-) False LOC120564470
TU114408 other upstream 470965 14501960 ~ 14507201 (-) False LOC120563775
TU114449 other upstream 935460 14966455 ~ 14967447 (-) False si:ch1073-390k14.1
TU114482 other upstream 1035044 15066039 ~ 15073350 (-) True G85014

Expression Profile