Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039809213.1 |
| length | 1214 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 9 |
| gene id | scamp2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053119.1 |
| NCBI id | CM020916.1 |
| chromosome length | 42187026 |
| location | 10643916 ~ 10662678 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0015031 | protein transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| K19995 | SCAMP; secretory carrier-associated membrane protein |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU112893 | lncRNA | downstream | 103255 | 10537831 ~ 10540661 (-) | True | G83854 |
| TU112852 | lncRNA | downstream | 211772 | 10389244 ~ 10432144 (-) | False | G83826 |
| TU112840 | lncRNA | downstream | 271737 | 10368773 ~ 10372179 (-) | True | G83819 |
| TU112839 | lncRNA | downstream | 271737 | 10368863 ~ 10372179 (-) | False | G83819 |
| TU112788 | lncRNA | downstream | 276034 | 10363800 ~ 10367882 (-) | False | G83786 |
| TU112914 | lncRNA | upstream | 43740 | 10706418 ~ 10713107 (-) | False | LOC120564603 |
| TU112966 | lncRNA | upstream | 160608 | 10823286 ~ 10900547 (-) | False | oaz2a |
| TU112963 | lncRNA | upstream | 237978 | 10900656 ~ 10913212 (-) | False | oaz2a |
| TU112979 | lncRNA | upstream | 261825 | 10924503 ~ 10925018 (-) | True | G83911 |
| TU113034 | lncRNA | upstream | 348184 | 11010862 ~ 11011238 (-) | True | G83941 |
| XM_039809210.1 | mRNA | downstream | 11131 | 10546775 ~ 10632785 (-) | False | map1ab |
| XM_039809208.1 | mRNA | downstream | 11131 | 10546775 ~ 10632785 (-) | False | map1ab |
| XM_039809209.1 | mRNA | downstream | 11131 | 10546775 ~ 10632785 (-) | False | map1ab |
| XM_039809207.1 | mRNA | downstream | 11131 | 10546775 ~ 10632785 (-) | True | map1ab |
| XM_039809211.1 | mRNA | downstream | 11131 | 10546775 ~ 10632785 (-) | False | map1ab |
| XM_039807490.1 | mRNA | upstream | 21175 | 10683853 ~ 10686618 (-) | True | trex4 |
| XM_039807488.1 | mRNA | upstream | 21175 | 10683853 ~ 10685983 (-) | False | trex4 |
| XM_039807487.1 | mRNA | upstream | 21175 | 10683853 ~ 10685835 (-) | False | trex4 |
| XM_039807485.1 | mRNA | upstream | 31206 | 10693884 ~ 10705324 (-) | True | LOC120563355 |
| XM_039809736.1 | mRNA | upstream | 43541 | 10706219 ~ 10714845 (-) | True | LOC120564603 |
| TU112851 | other | downstream | 211772 | 10427562 ~ 10432144 (-) | True | G83826 |
| XR_005640102.1 | other | downstream | 463919 | 10174824 ~ 10179997 (-) | False | tdg.2 |
| TU112643 | other | downstream | 555316 | 10086364 ~ 10088600 (-) | False | pik3c2a |
| XR_005640161.1 | other | downstream | 570494 | 10073293 ~ 10073422 (-) | True | LOC120564824 |
| XR_005640160.1 | other | downstream | 1133845 | 9509942 ~ 9510071 (-) | True | LOC120564823 |
| TU113209 | other | upstream | 1225349 | 11888027 ~ 11888398 (-) | True | G84083 |
| TU113260 | other | upstream | 1478845 | 12141523 ~ 12144546 (-) | True | G84123 |
| TU113814 | other | upstream | 2567939 | 13230617 ~ 13231095 (-) | True | G84530 |
| TU113910 | other | upstream | 2911153 | 13573831 ~ 13617896 (-) | True | mafb |
| TU114030 | other | upstream | 3368426 | 14031104 ~ 14033215 (-) | False | zgc:77752 |
