RNA id: XM_039809697.1


Basic Information

Item Value
RNA id XM_039809697.1
length 3128
RNA type mRNA
GC content 0.51
exon number 28
gene id nat10
representative False

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 19788711 ~ 19798138 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ATTAACGTCTGTCTGACTCCACGTGAGTGTATCAACCATGGTATCAACAGCATGATGGCTGGTGTGTAAATTCAGCCCTCGACTTGTTGGAAGTGCTTTAAGATTAAACAACAAACAGTTTGTCTGTAACAGAAGTAGCAGTGAGACGATGGCAACAGTCCGCAAGAAGGTAGACAACCGGATTCGTGTCCAGATAGAGAATGGAGTCGCTTTGCAGCATCGGTCCATATTTGTGGTGGTGGGAGATCGAGGGAGAGATCAGGTTGTCATTTTGCATCACATGCTGTCTAAAGCTGCCGTCAGAGCAAGACCTTCTGTGCTCTGGTGCTACAAAAAAGACCTGGGATTCAGCAGCAATCGGAAGAAGCGCATGAGACAGCTGCAGAAGAAGATAAAAACTGGCACGTTGAATCTGAATCAGGATGACCCGTTTGAACTGTTCATCGCTGCAACCAACATCCGATACTGTTACTACAACGAAACGCACAAGATCCTGGGAAACACCTACGGCATGTGCGTCTTGCAGGACTTCGAAGCTCTCACTCCCAATCTCTTAGCGAGAACTGTTGAGACTGTAGAAGGAGGTGGTATAGTGGTGATTCTGCTCAGGACGATGAACTCTCTCAAGCAGCTGTACACAATGACTATGGACGTGCACTCTCGTTACCGCACGGAGGCTCATCAGGATGTGGTGGGAAGGTTCAATGAGAGATTTATTCTATCACTTGCATCCTGCAAAAACTGCGTTGTTATTGATGACCAACTAAACATCCTGCCAATCTCCAGCCACATGGCAAACATCACGCCTGTTCCTCCAAAGACTCAGGAGGACGGTTTGTCTCCACGAGAACAGGAGCTGAAGGATCTGAAGGAGTCCCTTCAGGACACTCAGCCTGTGGGTGTGTTGGTGGATAGCTGCAGGACTATGGACCAGGCTAAAGGGGTGCTGAAGTTCATTGAGGCGATCTCAGAGAAGACTCTGAGGAGCACCGTGGCTCTGACTGCTGCCCGTGGCCGAGGCAAGTCTGCAGCACTGGGGCTGGCTGTCGCTGGGGCTGTGGCTTTTGGCTACTCCAATATTTTTGTAACCTCACCGAGCCCGGACAACCTCCATACCATGTTTGAGTTCATCTTCAAAGGCTTTGATGCTCTGCAGTATCAGGAGCATCTTGACTATGAAATCATCCAGTCTTTGAATCCAGAGTTCAACAAAGCTGTGGTGCGGGTGAACATCTTTAAAGAGCACCGGCAGACAATTCAGTACATCCACCCAGGTGATGCATTGAAGCTGGGCCAGGCTGAACTGCTGGTCATTGATGAGGCTGCAGCCATCCCTCTTCCTCTGGTTAAGAAACTGCTCGGGCCTTATCTGGTTTTCATGGCCTCCACCATCAACGGCTATGAAGGCACTGGTCGCTCTCTTTCCCTCAAACTGATTCAGCAGTTGAGGCAGCAGAGTGCAGACAGTCAGCAGAGCATGTCAGCCGAGAACAGGAGCAGCAACACAGAGAGGCTAGCAGCAGCTCGCTCTCTCCATGAGGTTTCTCTTCACGAGTCCATTCGGTATGCTCCAGGGGACGCTGTTGAGAAGTGGCTGAATGACCTGCTCTGTCTGGACTGTCTGAACATACCCAGGCTCATTTCTGGCTGCCCACTTCCAAAGACTTGTGACCTATATTATGTGAACAGAGACACACTGTTCTGTTACCACAAGGCTTCTGAGGCTTTCCTGCAGAGGTTGATGGCCCTCTATGTGGCATCGCACTACAAGAATTCCCCAAACGACCTGCAGATGTTGTCCGATGCTCCGGCCCATCACCTCTTCTGTCTCCTGCCACCTGTTCCTCCCACGCAGAACTCCCTACCGGAGGTCCTCGCTGTGGTGCAGGTGTGTCTGGAGGGAGAAATATCTCGGCAGTCCATCCTAAACAGTCTATCCAGAGGGAAGAAAGCCTCTGGTGACCTCATTCCCTGGACGGTGTCGGAACAGTTCCAAGACCCAGAGTTCGGGGGCCTCTCTGGAGGCAGAGTGGTGAGAATTGCTGTCAATCCAGACTACCAAGGGATGGGCTACGGCTCCAGAGCTCTCCAACTGCTGCAGATGTACTATGAGGGCAAGTTTCCCACCATGGATGAGAGCACACACTCAAATCATAATGAGATCACATCCGTCAGCAGTGAGGCGGTCAGTCTGCTGGAAGAGGTGATCACTCCACGGAAGGAGCTCCCTCCTCTGCTGCTGAAGCTGAGTgagaggagagcagagagacTGGACTATCTAGGAGTTTCCTATGGTCTTACTACACAGCTACTCAAGTTCTGGAGGAAAGCGGGTTATACTCCAGTCTACTTAAGACAAACCCCTAATGACCTGACAGGAGAGCACTCTTGCGTGATGCTGAAGGAGCTGAACACAGATGAAGCCCTGGAGCAGAGCCAGTGGCTGTCTGCATTCTGGAAAGaTTTCCGCCGGCGCTTCCTGTCCCTCCTCTCCTACCAGTTCAGCCGCTTCCATCCGAGCCTGTCACTCAGTATCCTGCAGAACAAGAAGTCCAAGGAGGAGACGAGCACTCTCAGTAGCTCCGAGCTGGCATCCCATTTCAGCCCCTACGACCTCAAACGTCTGGAGTTATATTCGAGGAGCATGGTGGACTACCACCTCATCATGGACCTGATCCCAACAGTGGCTCGCATGTTTTTCCTCAAGCAGCTCGGCGACGTCTCTCTCTCAGCCGCACAGTGTGCATTACTGCTGGGCATAGGGTTACAGCACAAATCAGTAGAACAGCTAGAAAAGGAAATTGAACTCCCAAGCTCGCAACTCATGGGCCTCTTCAACCGTCTGATCCGGAAATTTGTGCAAGTCTTCACCAGCATCCAAGAAAAAGCTATTGAGGCACAGATGGCGACCACTAAAGACGTTTCCATGGAGCCGACCGTCAGAAGTCTTAATGATGATCTGAATGAAGCAGCTAAAGAGTTTGAGGAGAGACACAAGCAGGATGTAGAGAAAGTGAAGGAAATGGACATGGAAGAGTGAGTATGAGGTACAAGATCCGTGGAGATGATGAGGAATGGGACCAGGTGTTGAAGAAAGCAGGGAACACAGCCATCGTCAGCATCAAGAG

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008080 N-acetyltransferase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU116652 lncRNA downstream 11926 19774307 ~ 19777043 (-) True G86566
TU116631 lncRNA downstream 63776 19723973 ~ 19725193 (-) True G86549
TU116624 lncRNA downstream 93154 19694995 ~ 19695815 (-) True G86543
TU116619 lncRNA downstream 109880 19674923 ~ 19679089 (-) True G86540
TU116589 lncRNA downstream 170923 19616653 ~ 19618046 (-) True G86517
TU116662 lncRNA upstream 23402 19821540 ~ 19823373 (-) True G86575
TU116708 lncRNA upstream 216200 20014338 ~ 20015812 (-) True G86605
TU116779 lncRNA upstream 443295 20241433 ~ 20241850 (-) True G86652
TU116787 lncRNA upstream 452752 20250890 ~ 20252526 (-) True G86660
TU116788 lncRNA upstream 452752 20250890 ~ 20264206 (-) False G86660
XM_039807430.1 mRNA downstream 27059 19753404 ~ 19761910 (-) True LOC120563329
XM_039809702.1 mRNA upstream 994 19799132 ~ 19812873 (-) False caprin1b
XM_039809699.1 mRNA upstream 994 19799132 ~ 19812872 (-) True caprin1b
XM_039809815.1 mRNA upstream 87773 19885911 ~ 19954815 (-) False tspan18b
XM_039809814.1 mRNA upstream 87773 19885911 ~ 19954448 (-) True tspan18b
XM_039808992.1 mRNA upstream 189645 19987783 ~ 20012310 (-) True cd82b
unassigned_transcript_376 other downstream 106052 19682846 ~ 19682917 (-) True trnap-agg_7
TU116584 other downstream 217047 19570302 ~ 19571922 (-) False cep152
TU116428 other downstream 400394 19387822 ~ 19388575 (-) True G86402
TU116306 other downstream 471559 19315435 ~ 19317410 (-) False arpp19b
TU116124 other downstream 778053 19007196 ~ 19010916 (-) True G86194
TU116763 other upstream 454501 20252639 ~ 20259259 (-) True G86638
XR_005640056.1 other upstream 1008744 20806882 ~ 20828603 (-) False LOC120564033
TU117029 other upstream 1079573 20877711 ~ 20879638 (-) False LOC120563850
TU117396 other upstream 1914904 21713042 ~ 21713554 (-) True G87140
TU117418 other upstream 1936868 21735006 ~ 21739328 (-) True LOC120564778

Expression Profile