Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00006591 |
| length | 807 |
| RNA type | nonsense_mediated_decay |
| GC content | 0.46 |
| exon number | 7 |
| gene id | XLOC_003365 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007122.7 |
| NCBI id | CM002895.2 |
| chromosome length | 45484837 |
| location | 15878343 ~ 15915788 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0015937 | coenzyme A biosynthetic process | biological_process |
| GO:0005829 | cytosol | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004594 | pantothenate kinase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040426-1592 | Predicted to enable pantothenate kinase activity. Predicted to be involved in coenzyme A biosynthetic process. Predicted to be active in cytosol and nucleus. Orthologous to human PANK4 (pantothenate kinase 4 (inactive)). |
| ensembl_id | ENSDART00000158711 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00006585 | lncRNA | upstream | 85574 | 15799383 ~ 15801396 (+) | True | XLOC_003363 |
| TCONS_00006584 | lncRNA | upstream | 107719 | 15776072 ~ 15779251 (+) | True | XLOC_003362 |
| TCONS_00006583 | lncRNA | upstream | 109750 | 15776072 ~ 15777220 (+) | False | XLOC_003362 |
| TCONS_00006581 | lncRNA | upstream | 403947 | 15480734 ~ 15483023 (+) | True | XLOC_003360 |
| TCONS_00008578 | lncRNA | upstream | 545557 | 15339344 ~ 15341413 (+) | True | XLOC_003359 |
| TCONS_00006595 | lncRNA | downstream | 70324 | 15972519 ~ 15975848 (+) | True | XLOC_003366 |
| TCONS_00006597 | lncRNA | downstream | 138392 | 16040587 ~ 16045625 (+) | False | XLOC_003367 |
| TCONS_00008579 | lncRNA | downstream | 1190883 | 17093078 ~ 17170177 (+) | True | XLOC_003374 |
| TCONS_00006611 | lncRNA | downstream | 1235653 | 17137848 ~ 17141076 (+) | False | XLOC_003375 |
| TCONS_00006612 | lncRNA | downstream | 1235657 | 17137852 ~ 17141052 (+) | False | XLOC_003375 |
| TCONS_00006586 | mRNA | upstream | 18514 | 15821433 ~ 15868456 (+) | True | XLOC_003364 |
| TCONS_00006582 | mRNA | upstream | 130585 | 15613218 ~ 15756385 (+) | True | XLOC_003361 |
| TCONS_00006580 | mRNA | upstream | 299836 | 15480695 ~ 15587134 (+) | False | XLOC_003360 |
| TCONS_00006577 | mRNA | upstream | 916059 | 14937904 ~ 14970911 (+) | True | XLOC_003357 |
| TCONS_00006574 | mRNA | upstream | 1135590 | 14676236 ~ 14751380 (+) | True | XLOC_003354 |
| TCONS_00006593 | mRNA | downstream | 28993 | 15931188 ~ 16013114 (+) | False | XLOC_003366 |
| TCONS_00006594 | mRNA | downstream | 29027 | 15931222 ~ 16005985 (+) | False | XLOC_003366 |
| TCONS_00006596 | mRNA | downstream | 138322 | 16040517 ~ 16062913 (+) | False | XLOC_003367 |
| TCONS_00006598 | mRNA | downstream | 138485 | 16040680 ~ 16064291 (+) | True | XLOC_003367 |
| TCONS_00006601 | mRNA | downstream | 235107 | 16137302 ~ 16141536 (+) | False | XLOC_003370 |
| TCONS_00006578 | other | upstream | 868446 | 15017185 ~ 15018524 (+) | False | XLOC_003358 |
| TCONS_00006571 | other | upstream | 1247910 | 14431273 ~ 14639060 (+) | False | XLOC_003353 |
| TCONS_00006572 | other | upstream | 1446144 | 14431365 ~ 14440826 (+) | False | XLOC_003353 |
| TCONS_00006565 | other | upstream | 1546187 | 14333441 ~ 14340783 (+) | False | XLOC_003351 |
| TCONS_00006553 | other | upstream | 1638530 | 14199896 ~ 14248440 (+) | True | XLOC_003347 |
| TCONS_00006599 | other | downstream | 168243 | 16070438 ~ 16083608 (+) | True | XLOC_003368 |
| TCONS_00006600 | other | downstream | 220591 | 16122786 ~ 16123082 (+) | True | XLOC_003369 |
| TCONS_00006621 | other | downstream | 1426370 | 17328565 ~ 17328681 (+) | True | XLOC_003376 |
| TCONS_00006622 | other | downstream | 1538396 | 17440591 ~ 17497093 (+) | False | XLOC_003377 |
| TCONS_00006623 | other | downstream | 1539112 | 17441307 ~ 17494543 (+) | False | XLOC_003377 |
