RNA id: XM_039810046.1


Basic Information

Item Value
RNA id XM_039810046.1
length 1698
RNA type mRNA
GC content 0.42
exon number 3
gene id etfbkmt
representative True

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 27135856 ~ 27143311 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GGAAAACCGTGTGGAGCTGGACGGGGATTTAACGCGtgtgttattatatattatctgtCAATATTTTTTGATGTGTAGAGATCTATTTTTAACAGTCAATGGTAGAGATATTTCCCGTTACCGTAACCATCACATGGTTATTAGCTGCAGCGAGAAACATTAAAAGCAGCTAAATTCATGTGGTCATAGATAACTATTTAACACTTCTATATATCTAGTATGTACGTGGTGAACTTGACTAGCGATAACGCTAGCTAACGTGCTAGATAAGCAGCTAATTTCCCCAAGAAGTTGATGACCATGTTGGGACTTTTAACGCCCCAAAGTCGTAATGTAAAAGTATTCATCAAAGCGTTTAGACAGACAAGGCGATCTAGATATTCATCAATTAGCTCTGTCCGCAACATCCGCAGCTTTAtttcagagaacacagagataGTTGGAGAGCAGAGCCTGACCCCAGAAGTCAAACTGAGACTGTTCACCCCAAACTGCAGATTTTGGAGAGAAAGACCGGAACTCTGGCCTTTTGATGACCCGTACTGGGCCATATACTGGCCAGGAGGACAGGCACTCTCAAGGTATCTCCTTGATAACCCTGCAGTGTGTCGGGGTAAGACCGTTCTGGATCTGGGGAGCGGCTGTGGAGCCTCGGCCATCGCTGCAAAACTATGTGGTGCTGCTCATGTAGTTGCCAATGACATTGACACTGttgCAGTGGTTGCGACCCAGATGAACTTTGAGTTGAACGGCTTGGAGCCAGCTGTTTGTTTGTCTAACAACATGATTGGTTCACAACCCGAGGGCTTTGACCTGATCCTCCTCGGAGACATGTTCTACGAAGAGGCCCTCGCCACCAGCCTTCACAGCTGGCTGGACCGCTGCATCAGAACCCAAGGCACCAAAGTCCTGATCGGAGATCCTGGAAGAGCTCAGTTTGAGGAACACGGCATCCGGCGACTCCTGCGTCAGCTGGCTCAGTTTGAGCTGCCTGAGTCTGTCAGAGAGGAGAACTACGGTCTGACCTGCAGCAGTGTTTGGTGCTACCGTCCTGAACTCTGAGGACCTTGTGCTTTCTTGTTTGAATGTGATAAATATGAACTCACTTTCTGTGAGAGGTGTTATGTGTTTGCTTTGTACTTATCTTCTTCACTCAGGGTCACTCAGTTCAGTTGTCACTTGTTGCCTTACGAAAATACTATCTcccaatgtgtttttaataccCAGGATGCATGTAATCAATACGACAAAGCAAAATCTTTATATGTGGATGTTTCATTTCCTGTAACTGTTGCTTggtaaataataatatagtttaCATACAGAATTAATaagcatttatttttctttttataacttGACCCAATGAATGTTGAAGTGCAGTGTACAAAATCCTTTAAATCCTAATTTGTTTTTACGTTATTTGGAGCAGAAGTCCCACTAGCTTTCAATAGCAAAACAAAGCATAGTAATTACTGACCAATATGGAGCCCCCCTATGTTCAATAATTAATGGATGAATATGTAATTATGTAACAAAGAAATCTCATAATtgaatctgtttttttatttttaaatattgactTTGGGCTCCACAGTGTGATTGATTTTTGTGGTTAAATAATTAACAGCGTTCTGCTTTTCATTCTTTAACACAAATCTTGGCCCTTGTTTCATAATAAACGTGTCATGCAGCATT

Function

GO:

id name namespace
GO:0006479 protein methylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0008276 protein methyltransferase activity molecular_function

KEGG:

id description
K22843 ETFBKMT, METTL20; ETFB lysine methyltransferase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU118902 lncRNA downstream 74720 27060552 ~ 27061136 (-) True G88274
TU118898 lncRNA downstream 78924 27055670 ~ 27056932 (-) True G88272
TU118856 lncRNA downstream 131671 27003091 ~ 27004185 (-) True G88245
TU118854 lncRNA downstream 131671 27003584 ~ 27004185 (-) False G88245
TU118855 lncRNA downstream 132350 27003091 ~ 27003506 (-) False G88245
TU118942 lncRNA upstream 26677 27169988 ~ 27170267 (-) True G88305
TU119051 lncRNA upstream 213768 27357079 ~ 27358179 (-) True G88380
TU119052 lncRNA upstream 216485 27359796 ~ 27362901 (-) True G88381
TU119063 lncRNA upstream 233548 27376859 ~ 27378018 (-) True G88391
TU119077 lncRNA upstream 277126 27420437 ~ 27424635 (-) True G88405
XM_039808766.1 mRNA downstream 58023 27061216 ~ 27077833 (-) True washc4
XM_039808765.1 mRNA downstream 58069 27061216 ~ 27077787 (-) False washc4
XM_039808767.1 mRNA downstream 58490 27061216 ~ 27077366 (-) False washc4
XM_039807775.1 mRNA downstream 85029 27049172 ~ 27050827 (-) True lrrc10
XM_039807767.1 mRNA downstream 91983 27034049 ~ 27043873 (-) True fnbp4
XM_039807389.1 mRNA upstream 47604 27190915 ~ 27202925 (-) False si:ch73-62b13.1
XM_039807387.1 mRNA upstream 47604 27190915 ~ 27198012 (-) True si:ch73-62b13.1
XM_039807388.1 mRNA upstream 47604 27190915 ~ 27197735 (-) False si:ch73-62b13.1
XM_039807473.1 mRNA upstream 80651 27223962 ~ 27229372 (-) True zgc:153031
XM_039807472.1 mRNA upstream 80653 27223964 ~ 27229368 (-) False zgc:153031
TU118864 other downstream 121445 27013237 ~ 27014411 (-) True G88249
TU118702 other downstream 460973 26673843 ~ 26674883 (-) False ptprjb.1
TU118402 other downstream 1539095 25596353 ~ 25596761 (-) True G87897
TU118279 other downstream 2070368 25064752 ~ 25065488 (-) True G87803
unassigned_transcript_380 other downstream 3219950 23915834 ~ 23915906 (-) True trnar-acg_18
TU118971 other upstream 80741 27224052 ~ 27228966 (-) False zgc:153031
TU119050 other upstream 211661 27354972 ~ 27355776 (-) True G88379
TU120007 other upstream 3578797 30722108 ~ 30722503 (-) True G89085
TU120195 other upstream 4099857 31243168 ~ 31250413 (-) True G89241
TU120334 other upstream 4963312 32106623 ~ 32108066 (-) True G89365

Expression Profile