Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005640065.1 |
| length | 472 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 3 |
| gene id | LOC120564131 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053119.1 |
| NCBI id | CM020916.1 |
| chromosome length | 42187026 |
| location | 25425552 ~ 25496305 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU118388 | lncRNA | downstream | 60777 | 25364568 ~ 25364775 (-) | True | G87883 |
| TU118381 | lncRNA | downstream | 71428 | 25351256 ~ 25354124 (-) | True | G87876 |
| XR_005640067.1 | lncRNA | downstream | 197347 | 25181329 ~ 25228205 (-) | True | LOC120564148 |
| TU118363 | lncRNA | downstream | 207829 | 25216720 ~ 25217723 (-) | True | G87865 |
| TU118291 | lncRNA | downstream | 257225 | 25168076 ~ 25168327 (-) | True | G87815 |
| TU118484 | lncRNA | upstream | 149441 | 25645746 ~ 25646956 (-) | False | phrf1 |
| TU118488 | lncRNA | upstream | 153024 | 25649329 ~ 25650117 (-) | True | G87961 |
| TU118491 | lncRNA | upstream | 239194 | 25735499 ~ 25736123 (-) | True | G87964 |
| TU118506 | lncRNA | upstream | 381395 | 25877700 ~ 25880981 (-) | True | LOC120563936 |
| XR_005640034.1 | lncRNA | upstream | 381984 | 25878289 ~ 25880970 (-) | False | LOC120563936 |
| XM_039808849.1 | mRNA | downstream | 38240 | 25302836 ~ 25387312 (-) | False | pamr1 |
| XM_039808850.1 | mRNA | downstream | 38246 | 25302836 ~ 25387306 (-) | False | pamr1 |
| XM_039808851.1 | mRNA | downstream | 38246 | 25302836 ~ 25387306 (-) | False | pamr1 |
| XM_039808848.1 | mRNA | downstream | 94499 | 25302836 ~ 25331053 (-) | True | pamr1 |
| XM_039808844.1 | mRNA | downstream | 131595 | 25269113 ~ 25293957 (-) | False | slc1a2b |
| XM_039807494.1 | mRNA | upstream | 120056 | 25616361 ~ 25617983 (-) | True | ascl1b |
| XM_039808532.1 | mRNA | upstream | 134471 | 25630776 ~ 25647000 (-) | True | phrf1 |
| XM_039808974.1 | mRNA | upstream | 155447 | 25651752 ~ 25688678 (-) | False | rassf7a |
| XM_039808973.1 | mRNA | upstream | 155447 | 25651752 ~ 25688678 (-) | False | rassf7a |
| XM_039808971.1 | mRNA | upstream | 155447 | 25651752 ~ 25674731 (-) | True | rassf7a |
| TU118279 | other | downstream | 360064 | 25064752 ~ 25065488 (-) | True | G87803 |
| XR_005640032.1 | other | downstream | 1509350 | 23909169 ~ 23916202 (-) | False | LOC120563922 |
| XR_005640031.1 | other | downstream | 1509350 | 23909169 ~ 23916202 (-) | False | LOC120563922 |
| unassigned_transcript_380 | other | downstream | 1509646 | 23915834 ~ 23915906 (-) | True | trnar-acg_18 |
| unassigned_transcript_379 | other | downstream | 1520379 | 23905102 ~ 23905173 (-) | True | trnam-cau_7 |
| TU118402 | other | upstream | 100048 | 25596353 ~ 25596761 (-) | True | G87897 |
| TU118702 | other | upstream | 1177538 | 26673843 ~ 26674883 (-) | False | ptprjb.1 |
| TU118864 | other | upstream | 1516932 | 27013237 ~ 27014411 (-) | True | G88249 |
| TU118971 | other | upstream | 1727747 | 27224052 ~ 27228966 (-) | False | zgc:153031 |
| TU119050 | other | upstream | 1858667 | 27354972 ~ 27355776 (-) | True | G88379 |
