RNA id: unassigned_transcript_369



Basic Information


Item Value
RNA id unassigned_transcript_369
length 72
RNA type tRNA
GC content 0.54
exon number 1
gene id trnae-uuc_60
representative True

Chromosome Information


Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 2517362 ~ 2517433 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TCCCATATGGTCTAGCGGTTAGGATTCCTGGTTTTCACCCAGGTGGCCCGGGTTCAACTCCCAGTATGGGAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU110025 lncRNA downstream 174807 2340405 ~ 2342555 (-) True G81700
TU110016 lncRNA downstream 219561 2296820 ~ 2297801 (-) False G81695
TU110014 lncRNA downstream 219843 2296820 ~ 2297519 (-) True G81695
TU110042 lncRNA upstream 25081 2542514 ~ 2542867 (-) True G81716
TU110043 lncRNA upstream 25081 2542514 ~ 2542867 (-) False G81716
TU110044 lncRNA upstream 31526 2548959 ~ 2549880 (-) True G81717
TU110046 lncRNA upstream 58137 2575570 ~ 2576163 (-) True G81718
TU110052 lncRNA upstream 66269 2583702 ~ 2591676 (-) True G81721
XM_039807620.1 mRNA downstream 150072 2366330 ~ 2367290 (-) True LOC120563454
XM_039807617.1 mRNA downstream 159274 2357170 ~ 2358088 (-) True LOC120563451
XM_039807619.1 mRNA downstream 184883 2330224 ~ 2332479 (-) True LOC120563453
XM_039807622.1 mRNA downstream 203095 2289532 ~ 2314267 (-) False LOC120563455
XM_039808535.1 mRNA upstream 191083 2708516 ~ 2723969 (-) True mphosph6
XM_039808116.1 mRNA upstream 234873 2752306 ~ 2819413 (-) True LOC120563733
XM_039808921.1 mRNA upstream 540151 3057584 ~ 3067921 (-) True fem1b
XM_039809713.1 mRNA upstream 589657 3107090 ~ 3108199 (-) True LOC120564583
XM_039809710.1 mRNA upstream 594873 3112306 ~ 3130047 (-) False LOC120564581
unassigned_transcript_368 other downstream 72532 2444759 ~ 2444830 (-) True trnak-uuu_14
TU109967 other downstream 404513 2110621 ~ 2112849 (-) True G81655
TU109743 other downstream 789621 1725152 ~ 1727741 (-) False ambra1b
TU109845 other downstream 852470 1613394 ~ 1664892 (-) True G81576
unassigned_transcript_366 other downstream 956637 1560654 ~ 1560725 (-) True trnae-uuc_58
unassigned_transcript_370 other upstream 13739 2531172 ~ 2531243 (-) True trnak-uuu_15
TU110061 other upstream 152882 2670315 ~ 2678513 (-) False G81726
TU110074 other upstream 167465 2684898 ~ 2685240 (-) True G81738
TU110247 other upstream 420319 2937752 ~ 2937990 (-) True G81832
TU110610 other upstream 862594 3380027 ~ 3380528 (-) True G82122