RNA id: TU123552


Basic Information

Item Value
RNA id TU123552
length 782
RNA type TUCP
GC content 0.46
exon number 2
gene id G91827
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 83806 ~ 423652 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CAGTGAGTCACCTTGGTGTCGTTTTTAACTAAAGAGAAGAGTTGCAGGCCAGGTGCGTTTCTTTTATTCACCTGTTAGATCAGTTTGTGTCCTCGTAGTGAGctttgacattttaatttaatttaaacaaaAGACGAACTGCCACAAATGACGGGTTTATTAGAAAACtaacatgttacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacatacacacagacacatacacacacacagacacagacgcagcacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagagacacacacacatacacacacagacacatacacacacacacacacacacacacacacacacacacacacacacacacacacagagacacacacacacacacacacagacacatacacacacacacacatacacacacaatgacacacacacacacacacacacacacacacagacacacacacacacacacacacacccacacacacacacacacacacacacacacacacacacacacacacacacacacacccac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123580 lncRNA upstream 2908 151624 ~ 151944 (+) False G91840
TU123579 lncRNA upstream 2908 151699 ~ 151944 (+) True G91840
TU123578 lncRNA upstream 3926 150540 ~ 150926 (+) True G91839
TU123558 lncRNA upstream 16295 92274 ~ 138557 (+) True G91829
TU123555 lncRNA upstream 18285 83806 ~ 136567 (+) False G91827
TU123597 lncRNA downstream 40888 196596 ~ 244841 (+) True G91843
TU123547 lncRNA downstream 43692 199400 ~ 200790 (+) False G91827
TU123549 lncRNA downstream 44756 200464 ~ 200790 (+) False G91827
TU123586 lncRNA downstream 102196 257904 ~ 274268 (+) False G91842
TU123593 lncRNA downstream 102196 257904 ~ 306121 (+) False G91842
XM_039811713.1 mRNA downstream 628491 784199 ~ 808239 (+) True stx6
XM_039811714.1 mRNA downstream 630994 786702 ~ 787874 (+) True LOC120565732
XM_039811715.1 mRNA downstream 630994 786702 ~ 787874 (+) False LOC120565732
XM_039811716.1 mRNA downstream 630994 786702 ~ 787874 (+) False LOC120565732
XM_039811564.1 mRNA downstream 676533 832241 ~ 854498 (+) True wdr18
TU123592 other downstream 117430 273138 ~ 317968 (+) False G91842
TU123666 other downstream 353433 509141 ~ 566466 (+) False G91887
TU123686 other downstream 385983 541691 ~ 542909 (+) True G91897
TU123696 other downstream 425099 580807 ~ 593877 (+) True G91903
TU123859 other downstream 566665 722373 ~ 758976 (+) True G92019

Expression Profile