RNA id: TU123554


Basic Information

Item Value
RNA id TU123554
length 307
lncRNA type inter_gene
GC content 0.49
exon number 3
gene id G91827
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 83806 ~ 423652 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

acacacacacacacacacacacacacacacacacacacacacacatagacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacattagacacacacacacacacacacacacacacacacagacagacacacacacacacagacagacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacagactcacacacacacagacacacacacacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123620 lncRNA upstream 6392 330469 ~ 331021 (+) True G91862
TU123584 lncRNA upstream 14556 273138 ~ 322857 (+) False G91842
TU123591 lncRNA upstream 14556 273138 ~ 322857 (+) True G91842
TU123595 lncRNA upstream 14556 273138 ~ 322857 (+) False G91842
TU123588 lncRNA upstream 14770 273138 ~ 322643 (+) False G91842
TU123645 lncRNA downstream 9955 433607 ~ 452499 (+) False G91877
TU123624 lncRNA downstream 22979 446631 ~ 447169 (+) False G91866
TU123626 lncRNA downstream 22979 446631 ~ 447169 (+) False G91866
TU123627 lncRNA downstream 22979 446631 ~ 447169 (+) False G91866
TU123644 lncRNA downstream 27772 451424 ~ 452499 (+) False G91877
XM_039811808.1 mRNA upstream 177956 141925 ~ 159457 (+) True LOC120565788
XM_039811713.1 mRNA downstream 360547 784199 ~ 808239 (+) True stx6
XM_039811714.1 mRNA downstream 363050 786702 ~ 787874 (+) True LOC120565732
XM_039811715.1 mRNA downstream 363050 786702 ~ 787874 (+) False LOC120565732
XM_039811716.1 mRNA downstream 363050 786702 ~ 787874 (+) False LOC120565732
XM_039811564.1 mRNA downstream 408589 832241 ~ 854498 (+) True wdr18
TU123592 other upstream 19445 273138 ~ 317968 (+) False G91842
TU123552 other upstream 181705 154852 ~ 155708 (+) True G91827
TU123666 other downstream 85489 509141 ~ 566466 (+) False G91887
TU123686 other downstream 118039 541691 ~ 542909 (+) True G91897
TU123696 other downstream 157155 580807 ~ 593877 (+) True G91903
TU123859 other downstream 298721 722373 ~ 758976 (+) True G92019
TU123860 other downstream 331943 755595 ~ 758976 (+) False G92019

Expression Profile