RNA id: TU123580


Basic Information

Item Value
RNA id TU123580
length 192
lncRNA type intronic
GC content 0.44
exon number 3
gene id G91840
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 151624 ~ 151944 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gttagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaaggggctagggaatgcattatgtcaatgactggtccccacaaagatagtgccacaaacctgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123578 lncRNA upstream 698 150540 ~ 150926 (+) True G91839
TU123558 lncRNA upstream 13067 92274 ~ 138557 (+) True G91829
TU123555 lncRNA upstream 15057 83806 ~ 136567 (+) False G91827
TU123597 lncRNA downstream 44652 196596 ~ 244841 (+) True G91843
TU123547 lncRNA downstream 47456 199400 ~ 200790 (+) False G91827
TU123549 lncRNA downstream 48520 200464 ~ 200790 (+) False G91827
TU123586 lncRNA downstream 105960 257904 ~ 274268 (+) False G91842
TU123593 lncRNA downstream 105960 257904 ~ 306121 (+) False G91842
XM_039811713.1 mRNA downstream 632255 784199 ~ 808239 (+) True stx6
XM_039811714.1 mRNA downstream 634758 786702 ~ 787874 (+) True LOC120565732
XM_039811715.1 mRNA downstream 634758 786702 ~ 787874 (+) False LOC120565732
XM_039811716.1 mRNA downstream 634758 786702 ~ 787874 (+) False LOC120565732
XM_039811564.1 mRNA downstream 680297 832241 ~ 854498 (+) True wdr18
TU123552 other downstream 2908 154852 ~ 155708 (+) True G91827
TU123592 other downstream 121194 273138 ~ 317968 (+) False G91842
TU123666 other downstream 357197 509141 ~ 566466 (+) False G91887
TU123686 other downstream 389747 541691 ~ 542909 (+) True G91897
TU123696 other downstream 428863 580807 ~ 593877 (+) True G91903

Expression Profile