RNA id: TU123597


Basic Information

Item Value
RNA id TU123597
length 226
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G91843
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 196596 ~ 244841 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtctgtgtgtgtgtgtgtgtctatgtgtgtgtgtgtgtctgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctgtccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123580 lncRNA upstream 44652 151624 ~ 151944 (+) False G91840
TU123579 lncRNA upstream 44652 151699 ~ 151944 (+) True G91840
TU123578 lncRNA upstream 45670 150540 ~ 150926 (+) True G91839
TU123558 lncRNA upstream 58039 92274 ~ 138557 (+) True G91829
TU123555 lncRNA upstream 60029 83806 ~ 136567 (+) False G91827
TU123586 lncRNA downstream 13063 257904 ~ 274268 (+) False G91842
TU123593 lncRNA downstream 13063 257904 ~ 306121 (+) False G91842
TU123584 lncRNA downstream 28297 273138 ~ 322857 (+) False G91842
TU123588 lncRNA downstream 28297 273138 ~ 322643 (+) False G91842
TU123589 lncRNA downstream 28297 273138 ~ 318106 (+) False G91842
XM_039811808.1 mRNA upstream 37139 141925 ~ 159457 (+) True LOC120565788
XM_039811713.1 mRNA downstream 539358 784199 ~ 808239 (+) True stx6
XM_039811714.1 mRNA downstream 541861 786702 ~ 787874 (+) True LOC120565732
XM_039811715.1 mRNA downstream 541861 786702 ~ 787874 (+) False LOC120565732
XM_039811716.1 mRNA downstream 541861 786702 ~ 787874 (+) False LOC120565732
XM_039811564.1 mRNA downstream 587400 832241 ~ 854498 (+) True wdr18
TU123552 other upstream 40888 154852 ~ 155708 (+) True G91827
TU123592 other downstream 28297 273138 ~ 317968 (+) False G91842
TU123666 other downstream 264300 509141 ~ 566466 (+) False G91887
TU123686 other downstream 296850 541691 ~ 542909 (+) True G91897
TU123696 other downstream 335966 580807 ~ 593877 (+) True G91903
TU123859 other downstream 477532 722373 ~ 758976 (+) True G92019

Expression Profile