RNA id: TU123646


Basic Information

Item Value
RNA id TU123646
length 347
lncRNA type inter_gene
GC content 0.47
exon number 4
gene id G91877
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 407787 ~ 452499 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tttctctgtgtgtgtgtgtgtgtctgtctctctctgtgtgtgtgtgtgtgtgtgtgtctctctctctctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtctgtgtgtgtgtgtttctgtgtgtgtgtgtgtgtgtgtgtgtgactgtgtgtgtgtgactgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtagcagcttTCCGCTGAAGTTCCCCTCGTTAGTTAATTAAACGATAGAAGAGTTTAAAAACAgcgaaaaagaaaagaaaaggataaCAAGAGGAGGCTCGGCAGCAGAAGAACAGAAGAACAGACACCCCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123556 lncRNA upstream 43565 342184 ~ 364222 (+) False G91827
TU123587 lncRNA upstream 65095 313214 ~ 342692 (+) False G91842
TU123620 lncRNA upstream 76766 330469 ~ 331021 (+) True G91862
TU123595 lncRNA upstream 84930 273138 ~ 322857 (+) False G91842
XR_005640316.1 lncRNA downstream 643 453142 ~ 465715 (+) False LOC120566002
XR_005640315.1 lncRNA downstream 643 453142 ~ 460605 (+) False LOC120566002
TU123658 lncRNA downstream 708 453207 ~ 459811 (+) True LOC120566002
TU123663 lncRNA downstream 3210 455709 ~ 457515 (+) True G91887
TU123665 lncRNA downstream 3210 455709 ~ 566466 (+) False G91887
XM_039811808.1 mRNA upstream 248330 141925 ~ 159457 (+) True LOC120565788
XM_039811713.1 mRNA downstream 331700 784199 ~ 808239 (+) True stx6
XM_039811714.1 mRNA downstream 334203 786702 ~ 787874 (+) True LOC120565732
XM_039811715.1 mRNA downstream 334203 786702 ~ 787874 (+) False LOC120565732
XM_039811716.1 mRNA downstream 334203 786702 ~ 787874 (+) False LOC120565732
XM_039811564.1 mRNA downstream 379742 832241 ~ 854498 (+) True wdr18
TU123592 other upstream 89819 273138 ~ 317968 (+) False G91842
TU123552 other upstream 252079 154852 ~ 155708 (+) True G91827
TU123666 other downstream 56642 509141 ~ 566466 (+) False G91887
TU123686 other downstream 89192 541691 ~ 542909 (+) True G91897
TU123696 other downstream 128308 580807 ~ 593877 (+) True G91903
TU123859 other downstream 269874 722373 ~ 758976 (+) True G92019
TU123860 other downstream 303096 755595 ~ 758976 (+) False G92019

Expression Profile