RNA id: TU123666



Basic Information


Item Value
RNA id TU123666
length 699
RNA type TUCP
GC content 0.50
exon number 4
gene id G91887
representative False

Chromosome Information


Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 455709 ~ 566466 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ctgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtctctgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtctctgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtctctgtctgtgtgtgtgtgtgtgtgtctgtgtgtctctgtctgtgtgtgtgtgtgtctctgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtttgtgtgtgtgtgtgtgtgtctctgtgtgtgtctgtgtgtgtctctgtgtgtgtgtgtgtgagtgtgtatgtgtgtctgtgtgtgtggttgtgtgtgtgtgtgcgtgtctctgtgtgtgtgtctctgtgtgtgtagtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtggctgtgtgtgttacCCAGTGGGGAATACAGGAGCGTTCTCCTGCTGTCCTGGAGCGTCAACATGCAGGACTGAGAAATGCTGTGTCACTTCCTGCATGTCCTCGTAGTTAAACAGGCTGTTAAAGCAAGActt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU123676 lncRNA upstream 1865 506486 ~ 507276 (+) True G91893
TU123675 lncRNA upstream 8576 500088 ~ 500565 (+) True G91892
XR_005640316.1 lncRNA upstream 43426 453142 ~ 465715 (+) False LOC120566002
TU123655 lncRNA upstream 46026 460700 ~ 463115 (+) True G91882
XR_005640315.1 lncRNA upstream 48536 453142 ~ 460605 (+) False LOC120566002
TU123683 lncRNA downstream 36319 602785 ~ 604831 (+) True G91896
TU123851 lncRNA downstream 118269 684735 ~ 685052 (+) True G92013
TU123853 lncRNA downstream 127967 694433 ~ 694750 (+) True G92015
TU123857 lncRNA downstream 155649 722115 ~ 773957 (+) False G92018
TU123865 lncRNA downstream 198988 765454 ~ 768674 (+) False G92022
XM_039811808.1 mRNA upstream 349684 141925 ~ 159457 (+) True LOC120565788
XM_039811713.1 mRNA downstream 217733 784199 ~ 808239 (+) True stx6
XM_039811714.1 mRNA downstream 220236 786702 ~ 787874 (+) True LOC120565732
XM_039811715.1 mRNA downstream 220236 786702 ~ 787874 (+) False LOC120565732
XM_039811716.1 mRNA downstream 220236 786702 ~ 787874 (+) False LOC120565732
XM_039811564.1 mRNA downstream 265775 832241 ~ 854498 (+) True wdr18
TU123592 other upstream 191173 273138 ~ 317968 (+) False G91842
TU123552 other upstream 353433 154852 ~ 155708 (+) True G91827
TU123696 other downstream 14341 580807 ~ 593877 (+) True G91903
TU123859 other downstream 155907 722373 ~ 758976 (+) True G92019
TU123860 other downstream 189129 755595 ~ 758976 (+) False G92019
TU124034 other downstream 602355 1168821 ~ 1170046 (+) True G92146
TU124050 other downstream 636421 1202887 ~ 1204046 (+) True G92157

Expression Profile