RNA id: TU123667


Basic Information

Item Value
RNA id TU123667
length 389
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G91887
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 455709 ~ 566466 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cgtgtctctgtgtgtgtttctctgtgtgtgtgtgagtttgtatgtctgtgtgtgtgtttgtgtgtgagtgtgtgtgtgcgcgtgtctctgtgtgtgtctctgtgtgtgtgtgagtgtgtatgtgtgtgtgtgtgtgagtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtggctgtgtgtgttacCCAGTGGGGAATACAGGAGCGTTCTCCTGCTGTCCTGGAGCGTCAACATGCAGGACTGAGAAATGCTGTGTCACTTCCTGCATGTCCTCGTAGTTAAACAGGCTGTTAAAGCAAGActt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123694 lncRNA upstream 6878 557869 ~ 558813 (+) True G91901
TU123693 lncRNA upstream 8221 555301 ~ 557470 (+) True G91900
TU123692 lncRNA upstream 8221 555736 ~ 557470 (+) False G91900
TU123691 lncRNA upstream 12064 552383 ~ 553627 (+) True G91899
TU123668 lncRNA upstream 33298 509141 ~ 532393 (+) False G91887
TU123683 lncRNA downstream 36319 602785 ~ 604831 (+) True G91896
TU123851 lncRNA downstream 118269 684735 ~ 685052 (+) True G92013
TU123853 lncRNA downstream 127967 694433 ~ 694750 (+) True G92015
TU123857 lncRNA downstream 155649 722115 ~ 773957 (+) False G92018
TU123865 lncRNA downstream 198988 765454 ~ 768674 (+) False G92022
XM_039811808.1 mRNA upstream 406234 141925 ~ 159457 (+) True LOC120565788
XM_039811713.1 mRNA downstream 217733 784199 ~ 808239 (+) True stx6
XM_039811714.1 mRNA downstream 220236 786702 ~ 787874 (+) True LOC120565732
XM_039811715.1 mRNA downstream 220236 786702 ~ 787874 (+) False LOC120565732
XM_039811716.1 mRNA downstream 220236 786702 ~ 787874 (+) False LOC120565732
XM_039811564.1 mRNA downstream 265775 832241 ~ 854498 (+) True wdr18
TU123686 other upstream 22782 541691 ~ 542909 (+) True G91897
TU123592 other upstream 247723 273138 ~ 317968 (+) False G91842
TU123552 other upstream 409983 154852 ~ 155708 (+) True G91827
TU123696 other downstream 14341 580807 ~ 593877 (+) True G91903
TU123859 other downstream 155907 722373 ~ 758976 (+) True G92019
TU123860 other downstream 189129 755595 ~ 758976 (+) False G92019
TU124034 other downstream 602355 1168821 ~ 1170046 (+) True G92146
TU124050 other downstream 636421 1202887 ~ 1204046 (+) True G92157

Expression Profile