RNA id: TU123668


Basic Information

Item Value
RNA id TU123668
length 260
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G91887
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 455709 ~ 566466 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ctgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtctgtgtatgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123676 lncRNA upstream 1865 506486 ~ 507276 (+) True G91893
TU123675 lncRNA upstream 8576 500088 ~ 500565 (+) True G91892
XR_005640316.1 lncRNA upstream 43426 453142 ~ 465715 (+) False LOC120566002
TU123691 lncRNA downstream 19990 552383 ~ 553627 (+) True G91899
TU123693 lncRNA downstream 22908 555301 ~ 557470 (+) True G91900
TU123692 lncRNA downstream 23343 555736 ~ 557470 (+) False G91900
TU123694 lncRNA downstream 25476 557869 ~ 558813 (+) True G91901
TU123664 lncRNA downstream 33213 565606 ~ 566466 (+) False G91887
XM_039811808.1 mRNA upstream 349684 141925 ~ 159457 (+) True LOC120565788
XM_039811713.1 mRNA downstream 251806 784199 ~ 808239 (+) True stx6
XM_039811714.1 mRNA downstream 254309 786702 ~ 787874 (+) True LOC120565732
XM_039811715.1 mRNA downstream 254309 786702 ~ 787874 (+) False LOC120565732
XM_039811716.1 mRNA downstream 254309 786702 ~ 787874 (+) False LOC120565732
XM_039811564.1 mRNA downstream 299848 832241 ~ 854498 (+) True wdr18
TU123592 other upstream 191173 273138 ~ 317968 (+) False G91842
TU123552 other upstream 353433 154852 ~ 155708 (+) True G91827
TU123686 other downstream 9298 541691 ~ 542909 (+) True G91897
TU123696 other downstream 48414 580807 ~ 593877 (+) True G91903
TU123859 other downstream 189980 722373 ~ 758976 (+) True G92019
TU123860 other downstream 223202 755595 ~ 758976 (+) False G92019
TU124034 other downstream 636428 1168821 ~ 1170046 (+) True G92146

Expression Profile