RNA id: TU123675


Basic Information

Item Value
RNA id TU123675
length 303
lncRNA type inter_gene
GC content 0.42
exon number 2
gene id G91892
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 500088 ~ 500565 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

aaaacacaagactttcacccaggaaacaggtgttcatgtcctgaagaagttaaggagaaaacacaagactttcacccaggaaacaggtgttcatgtcctgaagaagttaaggagaaaacacaagactttcacccaggaaacaggtgttcatgtcctggaagaagttaaggagaaaacacaagactttcacccaggaaacaggtgttcatgtcctgaagaagttaaggagaaaacacaagactttcacccaggaaacaggtggtcatgtcctgaagaagttaaggagaaaacacaagactttct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005640316.1 lncRNA upstream 34373 453142 ~ 465715 (+) False LOC120566002
TU123655 lncRNA upstream 36973 460700 ~ 463115 (+) True G91882
XR_005640315.1 lncRNA upstream 39483 453142 ~ 460605 (+) False LOC120566002
TU123658 lncRNA upstream 40277 453207 ~ 459811 (+) True LOC120566002
TU123663 lncRNA upstream 42573 455709 ~ 457515 (+) True G91887
TU123676 lncRNA downstream 5921 506486 ~ 507276 (+) True G91893
TU123679 lncRNA downstream 8531 509096 ~ 510112 (+) False G91895
TU123668 lncRNA downstream 8576 509141 ~ 532393 (+) False G91887
TU123678 lncRNA downstream 8713 509278 ~ 510112 (+) False G91895
TU123680 lncRNA downstream 8713 509278 ~ 510112 (+) True G91895
XM_039811808.1 mRNA upstream 340631 141925 ~ 159457 (+) True LOC120565788
XM_039811713.1 mRNA downstream 283634 784199 ~ 808239 (+) True stx6
XM_039811714.1 mRNA downstream 286137 786702 ~ 787874 (+) True LOC120565732
XM_039811715.1 mRNA downstream 286137 786702 ~ 787874 (+) False LOC120565732
XM_039811716.1 mRNA downstream 286137 786702 ~ 787874 (+) False LOC120565732
XM_039811564.1 mRNA downstream 331676 832241 ~ 854498 (+) True wdr18
TU123592 other upstream 182120 273138 ~ 317968 (+) False G91842
TU123552 other upstream 344380 154852 ~ 155708 (+) True G91827
TU123666 other downstream 8576 509141 ~ 566466 (+) False G91887
TU123686 other downstream 41126 541691 ~ 542909 (+) True G91897
TU123696 other downstream 80242 580807 ~ 593877 (+) True G91903
TU123859 other downstream 221808 722373 ~ 758976 (+) True G92019
TU123860 other downstream 255030 755595 ~ 758976 (+) False G92019

Expression Profile