RNA id: TU123676


Basic Information

Item Value
RNA id TU123676
length 455
lncRNA type inter_gene
GC content 0.51
exon number 3
gene id G91893
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 506486 ~ 507276 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ggaggtgtgttcaggtgcattctgggtgtgctggtcttacagggaggtgtgttcaggtgctttctgggcgtgctggtcttacagggaggtgtgttcaggtgcattctgggcgtgctggtcttgcagggaggtgtgttcaggtgcattctgggcgtgctggtcttacagggaggtgtgttcaggtgctttctgggagtattgctatcttgaggcagtgggaagtgatcgcaccattgaccaacagaaacctggtctaaagtcaataacgcagcatttcattgttattttaacagagcattagtaaaatgctcctaggctcgtgcacagcagcgcgcacactatgcttgttacacacacagtgacacacagcagccacacacacacacacaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123675 lncRNA upstream 5921 500088 ~ 500565 (+) True G91892
XR_005640316.1 lncRNA upstream 40771 453142 ~ 465715 (+) False LOC120566002
TU123655 lncRNA upstream 43371 460700 ~ 463115 (+) True G91882
XR_005640315.1 lncRNA upstream 45881 453142 ~ 460605 (+) False LOC120566002
TU123658 lncRNA upstream 46675 453207 ~ 459811 (+) True LOC120566002
TU123679 lncRNA downstream 1820 509096 ~ 510112 (+) False G91895
TU123668 lncRNA downstream 1865 509141 ~ 532393 (+) False G91887
TU123678 lncRNA downstream 2002 509278 ~ 510112 (+) False G91895
TU123680 lncRNA downstream 2002 509278 ~ 510112 (+) True G91895
TU123682 lncRNA downstream 13211 520487 ~ 604831 (+) False G91896
XM_039811808.1 mRNA upstream 347029 141925 ~ 159457 (+) True LOC120565788
XM_039811713.1 mRNA downstream 276923 784199 ~ 808239 (+) True stx6
XM_039811714.1 mRNA downstream 279426 786702 ~ 787874 (+) True LOC120565732
XM_039811715.1 mRNA downstream 279426 786702 ~ 787874 (+) False LOC120565732
XM_039811716.1 mRNA downstream 279426 786702 ~ 787874 (+) False LOC120565732
XM_039811564.1 mRNA downstream 324965 832241 ~ 854498 (+) True wdr18
TU123592 other upstream 188518 273138 ~ 317968 (+) False G91842
TU123552 other upstream 350778 154852 ~ 155708 (+) True G91827
TU123666 other downstream 1865 509141 ~ 566466 (+) False G91887
TU123686 other downstream 34415 541691 ~ 542909 (+) True G91897
TU123696 other downstream 73531 580807 ~ 593877 (+) True G91903
TU123859 other downstream 215097 722373 ~ 758976 (+) True G92019
TU123860 other downstream 248319 755595 ~ 758976 (+) False G92019

Expression Profile