RNA id: TU123686


Basic Information

Item Value
RNA id TU123686
length 1078
RNA type TUCP
GC content 0.42
exon number 3
gene id G91897
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 541691 ~ 542909 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTTAACTGTTAGTTTTATTcagtaaaaacatatatattttattggcACTTTATTTGTCACATCTGCAGTCATAATTAAGAGTCAATTCATACAAAATGAGAAActtaaaacaacaaattaaagcAGCTTTAACTGCAGCTCAGGCTGAGTAGCAAAGACTGTGAGAGAAGTTTAAACATTTGAAGAAATCACACTCCTGACACTGATCATTTTTAAAATCTCTACAttaaaacttccaccacaaatCAGCGGCCGTATTTCACCCGACAATTATCATTCAAATTCtcggtttttattttataaagaaATCATTTGGATTTGGTGATAAAAAGAAAAGCGACAAAGACATcagaaaaaaacttgaaaaaaaaaaatctaaaaaaattgttaaaattcaaaaagtgtaaaaaaaataaataaataaaaaaaagggtaaaaaaaatgtcaataaaaaaagaaaaatgttgaaaGCATTGATAGTGGAAAAATTAACGTAGAAAAAAACCCGGCAAAAGCGCCGACAgcacatttaaatgaaattatatCTGATATGATGGCGGCGGATGACGCCGATTGATCCTTTTGGAGACGCCGATTGGGCCTTTTGGAGACGCCGATTGGGCCTTTTGGAGACGCCGATTGGGCCTTTTGGAGACGCCGATTGGGCCTTTTGGAGACGCCGATTGGGCCTTTTGGAGACGCCGATTGGGCCTTTTGGAGACCGACGAGCCTTTGGAGACCCGATTGGGCCTTTGGAGACGCCGATTGGGCCTTTTGGAGATGCCGATTGGGCCTTTTGGAGACGCCGATTGGGCCTTTTGGAGACGCTGATTGGGCCTTTTGGAGATGATATTTGAGCCTTCTGACGCCGATTGGGCCTTTTGGAGACGCTGATTGGGCCTTTTGGAGATGCCGATTGGGCCTTTGGCCACGCCGATTGGGCCTTTTGGAGACGCCGATTGGGCCTTTTGGAGATGATATTTGAGCCTTCTGACGCTGATTGGGCCTTTTGGAGATGTCGATTGGGCCTTTTGGAGACGCCGATTGGGCCTTTTGGAGACGCTGATTGGGCCTTTTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123668 lncRNA upstream 9298 509141 ~ 532393 (+) False G91887
TU123679 lncRNA upstream 31579 509096 ~ 510112 (+) False G91895
TU123678 lncRNA upstream 31579 509278 ~ 510112 (+) False G91895
TU123680 lncRNA upstream 31579 509278 ~ 510112 (+) True G91895
TU123676 lncRNA upstream 34415 506486 ~ 507276 (+) True G91893
TU123691 lncRNA downstream 9474 552383 ~ 553627 (+) True G91899
TU123693 lncRNA downstream 12392 555301 ~ 557470 (+) True G91900
TU123692 lncRNA downstream 12827 555736 ~ 557470 (+) False G91900
TU123694 lncRNA downstream 14960 557869 ~ 558813 (+) True G91901
TU123664 lncRNA downstream 22697 565606 ~ 566466 (+) False G91887
XM_039811808.1 mRNA upstream 382234 141925 ~ 159457 (+) True LOC120565788
XM_039811713.1 mRNA downstream 241290 784199 ~ 808239 (+) True stx6
XM_039811714.1 mRNA downstream 243793 786702 ~ 787874 (+) True LOC120565732
XM_039811715.1 mRNA downstream 243793 786702 ~ 787874 (+) False LOC120565732
XM_039811716.1 mRNA downstream 243793 786702 ~ 787874 (+) False LOC120565732
XM_039811564.1 mRNA downstream 289332 832241 ~ 854498 (+) True wdr18
TU123592 other upstream 223723 273138 ~ 317968 (+) False G91842
TU123552 other upstream 385983 154852 ~ 155708 (+) True G91827
TU123696 other downstream 37898 580807 ~ 593877 (+) True G91903
TU123859 other downstream 179464 722373 ~ 758976 (+) True G92019
TU123860 other downstream 212686 755595 ~ 758976 (+) False G92019
TU124034 other downstream 625912 1168821 ~ 1170046 (+) True G92146
TU124050 other downstream 659978 1202887 ~ 1204046 (+) True G92157

Expression Profile