RNA id: TU123692


Basic Information

Item Value
RNA id TU123692
length 226
lncRNA type inter_gene
GC content 0.47
exon number 3
gene id G91900
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 555301 ~ 557470 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtttgtggtgtgtgtttgtggtgtgtgtttgtggtgtgtgtttgtggagtgtgtttgtggagtgtgtttgtggtgtgtgtttgtggagtgtgtttgtggagtgtgtgtttgtggtgtgtgtttgtggtgtgtgtttgtggtgtgtgtttgtggtgtgtgtttgtggagtgtgtgtgtggggtgtgtgtttgtggagtgtgtttgtggagtGTGTTTGTGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123691 lncRNA upstream 2109 552383 ~ 553627 (+) True G91899
TU123668 lncRNA upstream 23343 509141 ~ 532393 (+) False G91887
TU123679 lncRNA upstream 45624 509096 ~ 510112 (+) False G91895
TU123678 lncRNA upstream 45624 509278 ~ 510112 (+) False G91895
TU123680 lncRNA upstream 45624 509278 ~ 510112 (+) True G91895
TU123694 lncRNA downstream 399 557869 ~ 558813 (+) True G91901
TU123664 lncRNA downstream 8136 565606 ~ 566466 (+) False G91887
TU123667 lncRNA downstream 8221 565691 ~ 566466 (+) False G91887
TU123683 lncRNA downstream 45315 602785 ~ 604831 (+) True G91896
TU123851 lncRNA downstream 127265 684735 ~ 685052 (+) True G92013
XM_039811808.1 mRNA upstream 396279 141925 ~ 159457 (+) True LOC120565788
XM_039811713.1 mRNA downstream 226729 784199 ~ 808239 (+) True stx6
XM_039811714.1 mRNA downstream 229232 786702 ~ 787874 (+) True LOC120565732
XM_039811715.1 mRNA downstream 229232 786702 ~ 787874 (+) False LOC120565732
XM_039811716.1 mRNA downstream 229232 786702 ~ 787874 (+) False LOC120565732
XM_039811564.1 mRNA downstream 274771 832241 ~ 854498 (+) True wdr18
TU123686 other upstream 12827 541691 ~ 542909 (+) True G91897
TU123592 other upstream 237768 273138 ~ 317968 (+) False G91842
TU123552 other upstream 400028 154852 ~ 155708 (+) True G91827
TU123696 other downstream 23337 580807 ~ 593877 (+) True G91903
TU123859 other downstream 164903 722373 ~ 758976 (+) True G92019
TU123860 other downstream 198125 755595 ~ 758976 (+) False G92019
TU124034 other downstream 611351 1168821 ~ 1170046 (+) True G92146
TU124050 other downstream 645417 1202887 ~ 1204046 (+) True G92157

Expression Profile