RNA id: TU123944


Basic Information

Item Value
RNA id TU123944
length 155
lncRNA type sense_over
GC content 0.51
exon number 4
gene id G92071
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 1103192 ~ 1301580 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ctgtgtgtctgtgtgtgtgtgtgtgtgggtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtctgtgtgtgtgtgtctgtctctgtgtgtgtctgtgtgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123960 lncRNA upstream 4750 1111418 ~ 1211840 (+) True G92085
TU123962 lncRNA upstream 5112 1182546 ~ 1211478 (+) True G92087
TU124045 lncRNA upstream 18873 1197258 ~ 1197717 (+) True G92154
TU123942 lncRNA upstream 24294 1128723 ~ 1192296 (+) True G92071
TU124032 lncRNA upstream 61873 1153274 ~ 1154717 (+) True G92144
TU123954 lncRNA downstream 57794 1299158 ~ 1327538 (+) True G92079
TU124088 lncRNA downstream 71639 1313003 ~ 1357868 (+) True G92177
TU123951 lncRNA downstream 115514 1356878 ~ 1407682 (+) True G92076
TU123950 lncRNA downstream 127658 1369022 ~ 1651313 (+) True G92075
TU123930 lncRNA downstream 139964 1381328 ~ 1385015 (+) True G92069
XM_039811799.1 mRNA upstream 191447 1010747 ~ 1025143 (+) True plppr3b
XM_039812306.1 mRNA upstream 207377 983651 ~ 1009213 (+) True med16
XM_039811565.1 mRNA upstream 261354 886359 ~ 955236 (+) True grin3bb
XM_039811566.1 mRNA upstream 261354 891578 ~ 955236 (+) False grin3bb
XM_039811564.1 mRNA upstream 362092 832241 ~ 854498 (+) True wdr18
XM_039812460.1 mRNA downstream 81041 1322405 ~ 1380914 (+) True LOC120566171
XM_039811453.1 mRNA downstream 296635 1537999 ~ 1574777 (+) True LOC120565564
XM_039811454.1 mRNA downstream 384210 1625574 ~ 1630680 (+) True LOC120565565
XM_039811455.1 mRNA downstream 394599 1635963 ~ 1637498 (+) True sid1
XM_039811456.1 mRNA downstream 626357 1867721 ~ 1889087 (+) True LOC120565570
TU124050 other upstream 12544 1202887 ~ 1204046 (+) True G92157
TU124034 other upstream 46544 1168821 ~ 1170046 (+) True G92146
TU123859 other upstream 457614 722373 ~ 758976 (+) True G92019
TU123860 other upstream 457614 755595 ~ 758976 (+) False G92019
TU123696 other upstream 622713 580807 ~ 593877 (+) True G91903
TU124067 other downstream 23 1241387 ~ 1256194 (+) True G92169
TU124103 other downstream 222451 1463815 ~ 1535856 (+) False LOC120565410
TU124120 other downstream 337591 1578955 ~ 1910061 (+) True G92201
TU124157 other downstream 455610 1696974 ~ 1804395 (+) True G92234
TU124195 other downstream 626288 1867652 ~ 2000993 (+) True G92264

Expression Profile