RNA id: TU124095


Basic Information

Item Value
RNA id TU124095
length 365
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G92183
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 1391329 ~ 1412871 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

aggtaaggactacatgctcagtagctaggtaagactacatgctcagtagctaggtaagactacatgctcagtagccaggtaaggactacatgctcagtagctaggtaagactacatgcctcagtagctaggtaaggactacatgctcagtagctaggtaagactacatgctcagtagctaggtaagactacatgctcagtagctaggtaagactacatgctcagtagctaggtaaggactacatgctcagtagctaggtaaggactacatgctcagtagctaggtaaggactacatgagctagctagctgtttctctaacttcagtcagtacaaggcaggattagccgggagacttcttctaaac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123951 lncRNA upstream 4800 1356878 ~ 1407682 (+) True G92076
TU123959 lncRNA upstream 9555 1385398 ~ 1402927 (+) True G92084
TU123957 lncRNA upstream 24605 1387509 ~ 1387877 (+) True G92082
TU123930 lncRNA upstream 27467 1381328 ~ 1385015 (+) True G92069
TU124088 lncRNA upstream 54614 1313003 ~ 1357868 (+) True G92177
TU123932 lncRNA downstream 5878 1418749 ~ 1648238 (+) False G92070
TU123933 lncRNA downstream 5878 1418749 ~ 1420539 (+) True G92070
TU123934 lncRNA downstream 5878 1418749 ~ 1676140 (+) False G92070
XR_005640235.1 lncRNA downstream 20787 1433658 ~ 1436614 (+) True LOC120565412
TU123955 lncRNA downstream 45292 1458163 ~ 1476779 (+) True G92080
XM_039812460.1 mRNA upstream 31568 1322405 ~ 1380914 (+) True LOC120566171
XM_039811451.1 mRNA upstream 183803 1222333 ~ 1228679 (+) True trmt13
XM_039811799.1 mRNA upstream 387339 1010747 ~ 1025143 (+) True plppr3b
XM_039812306.1 mRNA upstream 403269 983651 ~ 1009213 (+) True med16
XM_039811566.1 mRNA upstream 457246 891578 ~ 955236 (+) False grin3bb
XM_039811453.1 mRNA downstream 125128 1537999 ~ 1574777 (+) True LOC120565564
XM_039811454.1 mRNA downstream 212703 1625574 ~ 1630680 (+) True LOC120565565
XM_039811455.1 mRNA downstream 223092 1635963 ~ 1637498 (+) True sid1
XM_039811456.1 mRNA downstream 454850 1867721 ~ 1889087 (+) True LOC120565570
XM_039811232.1 mRNA downstream 478683 1891554 ~ 1908999 (+) True serpinc1
TU124067 other upstream 156288 1241387 ~ 1256194 (+) True G92169
TU124060 other upstream 187674 1220810 ~ 1224808 (+) False trmt13
TU124057 other upstream 187674 1221373 ~ 1224808 (+) False trmt13
TU124050 other upstream 208436 1202887 ~ 1204046 (+) True G92157
TU124034 other upstream 242436 1168821 ~ 1170046 (+) True G92146
TU124103 other downstream 50944 1463815 ~ 1535856 (+) False LOC120565410
TU124120 other downstream 166084 1578955 ~ 1910061 (+) True G92201
TU124157 other downstream 284103 1696974 ~ 1804395 (+) True G92234
TU124195 other downstream 454781 1867652 ~ 2000993 (+) True G92264
TU124197 other downstream 454781 1867652 ~ 1996750 (+) False G92264

Expression Profile