RNA id: TU124288


Basic Information

Item Value
RNA id TU124288
length 332
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G92322
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 2238384 ~ 2239423 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ctgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtctgtgtctgtgtctgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtgtttgtgtgtgtgtgtctgtttgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtttgtgtgtgtgtgtgtgtgtctgtgtctgtgtgtgtgtgtatgtctgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtctgtgtgtgtgtgtgtgtgtatgagtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU124240 lncRNA upstream 133336 2104413 ~ 2105048 (+) True G92286
TU124226 lncRNA upstream 144633 2076610 ~ 2093751 (+) False G92278
TU124220 lncRNA upstream 144633 2083920 ~ 2093751 (+) False G92278
TU124224 lncRNA upstream 154473 2070299 ~ 2083911 (+) False G92278
TU124294 lncRNA downstream 25844 2265267 ~ 2339571 (+) True G92324
TU124298 lncRNA downstream 55930 2295353 ~ 2323896 (+) True G92328
TU124331 lncRNA downstream 126476 2365899 ~ 2368128 (+) False G92333
TU124304 lncRNA downstream 126697 2366120 ~ 2367446 (+) False G92333
TU124313 lncRNA downstream 126697 2366120 ~ 2368128 (+) False G92333
XM_039811243.1 mRNA upstream 166481 2050962 ~ 2071903 (+) False dph5
XM_039811242.1 mRNA upstream 175380 2050964 ~ 2063004 (+) True dph5
XM_039811460.1 mRNA upstream 213419 1994819 ~ 2024965 (+) False LOC120565575
XM_039811459.1 mRNA upstream 244516 1980838 ~ 1993868 (+) True LOC120565574
XM_039811232.1 mRNA upstream 329385 1891554 ~ 1908999 (+) True serpinc1
XM_039811244.1 mRNA downstream 132631 2372054 ~ 2379851 (+) False reep6
XM_039811245.1 mRNA downstream 132631 2372054 ~ 2379851 (+) False reep6
XM_039811234.1 mRNA downstream 172808 2412231 ~ 2420605 (+) True LOC120565427
XM_039811235.1 mRNA downstream 184564 2423987 ~ 2427127 (+) False LOC120565428
XM_039811236.1 mRNA downstream 184610 2424033 ~ 2427127 (+) True LOC120565428
TU124251 other upstream 162280 2072182 ~ 2076104 (+) True G92293
TU124125 other upstream 212453 1988808 ~ 2025931 (+) True LOC120565575
TU124195 other upstream 237391 1867652 ~ 2000993 (+) True G92264
TU124197 other upstream 241634 1867652 ~ 1996750 (+) False G92264
TU124157 other upstream 433989 1696974 ~ 1804395 (+) True G92234
TU124333 other downstream 126697 2366120 ~ 2368316 (+) False G92333
TU124352 other downstream 132565 2371988 ~ 2380260 (+) False reep6
TU124353 other downstream 132565 2371988 ~ 2380260 (+) True reep6
TU124750 other downstream 294321 2533744 ~ 2582371 (+) True G92575
TU124983 other downstream 742803 2982226 ~ 2983014 (+) True G92770

Expression Profile