RNA id: TU124988


Basic Information

Item Value
RNA id TU124988
length 525
RNA type TUCP
GC content 0.49
exon number 4
gene id G92773
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 3010674 ~ 3094410 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtatgtgtttgtgtgtgtgtgtgtgtgtgtgtctgtatgtgtctgtgtgtgtgtctgtgtgtatgtgtgtgtgtgtgtgtctgtgtctgtgtctgtgtctctgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctgtgtctgtgtctgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctctgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtgtgtttgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtggtgtgtgtgtgtgtgtgtgtgtgtgtgggtgtgt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU125005 lncRNA upstream 3701 3007696 ~ 3008065 (+) True G92779
TU124954 lncRNA upstream 145808 2860992 ~ 2865958 (+) True G92747
TU124947 lncRNA upstream 170564 2840968 ~ 2841202 (+) True G92740
TU124929 lncRNA upstream 211733 2775493 ~ 2800033 (+) True G92722
TU124919 lncRNA upstream 250409 2761132 ~ 2761357 (+) True G92713
TU125049 lncRNA downstream 12045 3106455 ~ 3186576 (+) True G92799
TU125054 lncRNA downstream 14661 3109071 ~ 3109455 (+) True G92802
TU125055 lncRNA downstream 14661 3109071 ~ 3150235 (+) False G92802
TU125021 lncRNA downstream 16027 3110437 ~ 3162874 (+) False G92784
TU125022 lncRNA downstream 32022 3126432 ~ 3162874 (+) False G92784
XM_039811247.1 mRNA upstream 9227 2999620 ~ 3002539 (+) True LOC120565438
XM_039811246.1 mRNA upstream 152648 2845744 ~ 2859118 (+) True LOC120565437
XM_039811225.1 mRNA upstream 170907 2821642 ~ 2840859 (+) True LOC120565422
XM_039811224.1 mRNA upstream 417783 2586515 ~ 2593983 (+) True LOC120565421
XM_039811240.1 mRNA upstream 550169 2450531 ~ 2461597 (+) True LOC120565432
XM_039811502.1 mRNA downstream 123316 3217726 ~ 3574149 (+) True LOC120565597
XM_039811258.1 mRNA downstream 243422 3337832 ~ 3348216 (+) True LOC120565455
XM_039812269.1 mRNA downstream 535774 3630184 ~ 3633365 (+) True LOC120566051
XM_039812272.1 mRNA downstream 535774 3630184 ~ 3633365 (+) False LOC120566051
XM_039812271.1 mRNA downstream 535774 3630184 ~ 3633365 (+) False LOC120566051
TU124983 other upstream 28752 2982226 ~ 2983014 (+) True G92770
TU124750 other upstream 429395 2533744 ~ 2582371 (+) True G92575
TU124352 other upstream 631506 2371988 ~ 2380260 (+) False reep6
TU124353 other upstream 631506 2371988 ~ 2380260 (+) True reep6
TU124333 other upstream 643450 2366120 ~ 2368316 (+) False G92333
TU125014 other downstream 31479 3125889 ~ 3132204 (+) True G92782
TU125102 other downstream 257357 3351767 ~ 3366729 (+) True G92826
TU125125 other downstream 391369 3485779 ~ 3490360 (+) True G92838
TU125164 other downstream 463587 3557997 ~ 3577980 (+) False LOC120565459
TU125178 other downstream 497695 3592105 ~ 3593384 (+) False LOC120565459

Expression Profile