RNA id: TU124990


Basic Information

Item Value
RNA id TU124990
length 219
lncRNA type inter_gene
GC content 0.49
exon number 3
gene id G92773
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 3010674 ~ 3094410 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tctgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtgtttgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtctgagtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU125039 lncRNA upstream 425 3057413 ~ 3065116 (+) True G92791
TU124997 lncRNA upstream 27642 3010674 ~ 3037899 (+) False G92773
TU124996 lncRNA upstream 28316 3012482 ~ 3037225 (+) False G92773
TU125033 lncRNA upstream 32480 3026529 ~ 3033061 (+) True G92785
TU125007 lncRNA upstream 43332 3021516 ~ 3022209 (+) True G92781
TU125031 lncRNA downstream 6167 3075161 ~ 3162874 (+) False G92784
TU125049 lncRNA downstream 37461 3106455 ~ 3186576 (+) True G92799
TU125054 lncRNA downstream 40077 3109071 ~ 3109455 (+) True G92802
TU125055 lncRNA downstream 40077 3109071 ~ 3150235 (+) False G92802
TU125021 lncRNA downstream 41443 3110437 ~ 3162874 (+) False G92784
XM_039811247.1 mRNA upstream 63002 2999620 ~ 3002539 (+) True LOC120565438
XM_039811246.1 mRNA upstream 206423 2845744 ~ 2859118 (+) True LOC120565437
XM_039811225.1 mRNA upstream 224682 2821642 ~ 2840859 (+) True LOC120565422
XM_039811224.1 mRNA upstream 471558 2586515 ~ 2593983 (+) True LOC120565421
XM_039811240.1 mRNA upstream 603944 2450531 ~ 2461597 (+) True LOC120565432
XM_039811502.1 mRNA downstream 148732 3217726 ~ 3574149 (+) True LOC120565597
XM_039811258.1 mRNA downstream 268838 3337832 ~ 3348216 (+) True LOC120565455
XM_039812269.1 mRNA downstream 561190 3630184 ~ 3633365 (+) True LOC120566051
XM_039812272.1 mRNA downstream 561190 3630184 ~ 3633365 (+) False LOC120566051
XM_039812271.1 mRNA downstream 561190 3630184 ~ 3633365 (+) False LOC120566051
TU124998 other upstream 50688 3010674 ~ 3014853 (+) False G92773
TU124983 other upstream 82527 2982226 ~ 2983014 (+) True G92770
TU124750 other upstream 483170 2533744 ~ 2582371 (+) True G92575
TU124352 other upstream 685281 2371988 ~ 2380260 (+) False reep6
TU125014 other downstream 56895 3125889 ~ 3132204 (+) True G92782
TU125102 other downstream 282773 3351767 ~ 3366729 (+) True G92826
TU125125 other downstream 416785 3485779 ~ 3490360 (+) True G92838
TU125164 other downstream 489003 3557997 ~ 3577980 (+) False LOC120565459
TU125178 other downstream 523111 3592105 ~ 3593384 (+) False LOC120565459

Expression Profile