RNA id: TU125007


Basic Information

Item Value
RNA id TU125007
length 229
lncRNA type inter_gene
GC content 0.41
exon number 2
gene id G92781
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 3021516 ~ 3022209 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gacaacattatgggatggatccctacagagatagaccttttagttaaagagtaagatccttttagtttaacatgaaacagccccgaaatcaccatcaccaaactccaccagactccatgtaaataatcaggactttcagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagcgtgtatagagccagcatatctccacatgtaaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU125005 lncRNA upstream 13451 3007696 ~ 3008065 (+) True G92779
TU124954 lncRNA upstream 155558 2860992 ~ 2865958 (+) True G92747
TU124947 lncRNA upstream 180314 2840968 ~ 2841202 (+) True G92740
TU124929 lncRNA upstream 221483 2775493 ~ 2800033 (+) True G92722
TU124919 lncRNA upstream 260159 2761132 ~ 2761357 (+) True G92713
TU125037 lncRNA downstream 3883 3026092 ~ 3067077 (+) True G92789
TU125033 lncRNA downstream 4320 3026529 ~ 3033061 (+) True G92785
TU125028 lncRNA downstream 24280 3046489 ~ 3162874 (+) False G92784
TU124986 lncRNA downstream 33785 3055994 ~ 3094410 (+) False G92773
TU125039 lncRNA downstream 35204 3057413 ~ 3065116 (+) True G92791
XM_039811247.1 mRNA upstream 18977 2999620 ~ 3002539 (+) True LOC120565438
XM_039811246.1 mRNA upstream 162398 2845744 ~ 2859118 (+) True LOC120565437
XM_039811225.1 mRNA upstream 180657 2821642 ~ 2840859 (+) True LOC120565422
XM_039811224.1 mRNA upstream 427533 2586515 ~ 2593983 (+) True LOC120565421
XM_039811240.1 mRNA upstream 559919 2450531 ~ 2461597 (+) True LOC120565432
XM_039811502.1 mRNA downstream 195517 3217726 ~ 3574149 (+) True LOC120565597
XM_039811258.1 mRNA downstream 315623 3337832 ~ 3348216 (+) True LOC120565455
XM_039812269.1 mRNA downstream 607975 3630184 ~ 3633365 (+) True LOC120566051
XM_039812272.1 mRNA downstream 607975 3630184 ~ 3633365 (+) False LOC120566051
XM_039812271.1 mRNA downstream 607975 3630184 ~ 3633365 (+) False LOC120566051
TU124998 other upstream 6663 3010674 ~ 3014853 (+) False G92773
TU124983 other upstream 38502 2982226 ~ 2983014 (+) True G92770
TU124750 other upstream 439145 2533744 ~ 2582371 (+) True G92575
TU124352 other upstream 641256 2371988 ~ 2380260 (+) False reep6
TU125014 other downstream 103680 3125889 ~ 3132204 (+) True G92782
TU125102 other downstream 329558 3351767 ~ 3366729 (+) True G92826
TU125125 other downstream 463570 3485779 ~ 3490360 (+) True G92838
TU125164 other downstream 535788 3557997 ~ 3577980 (+) False LOC120565459
TU125178 other downstream 569896 3592105 ~ 3593384 (+) False LOC120565459

Expression Profile