RNA id: TU125014


Basic Information

Item Value
RNA id TU125014
length 538
RNA type TUCP
GC content 0.56
exon number 2
gene id G92782
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 3125889 ~ 3132204 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cgctggaTACAACCCATCAGGGTGGTAAATCTCTGCAGGATGACCCACTTCAGAAAGGTTGAAAATCACCAACTttcccctttttgtttttttaaagtaactatGGCAACCACATGGTCCCGTCAGAGCACACTGGAGGCTCCAAGACGACCGCTGCTCTCCCGGTCCGTTCCACATCCGGAGTCCCAATCCCGTCTCACtgatgcctgtctgtctgtcttcctgtccCCTGTAGCCAATGGCAACGACAGTAAGAAGTTCAAAGGCGACTTCAGAGGTCCCGGGCTGCCGTCCCGCGTCATCCACGTCCGCAAGCTTCCCAACGACATCAGCGAGGCCGAGGTCATCAGCCTGGGTCTGCCCTTCGGAGACGTCACCAACCTGCTGATGCTCAAAGCCAAAAACCAGGCCTTCTTGGAGATGAACTCGGAGGAAGCGGCCCAGAACATGGTGGCACTACTCCACGGTGATGCCCATCATCCGCCACCACCCGGTCCACCCAGTTCTCCAACCACAAGGAGCTCAAGACAGACAACTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU125054 lncRNA upstream 16434 3109071 ~ 3109455 (+) True G92802
TU124994 lncRNA upstream 31479 3015653 ~ 3094410 (+) False G92773
TU124986 lncRNA upstream 31479 3055994 ~ 3094410 (+) False G92773
TU124993 lncRNA upstream 38468 3012578 ~ 3087421 (+) False G92773
TU124995 lncRNA upstream 38468 3015653 ~ 3087421 (+) False G92773
TU125029 lncRNA downstream 1128 3133332 ~ 3162874 (+) False G92784
TU125036 lncRNA downstream 3212 3135416 ~ 3136578 (+) True G92788
TU125026 lncRNA downstream 6165 3138369 ~ 3162874 (+) True G92784
TU125032 lncRNA downstream 8110 3140314 ~ 3162874 (+) False G92784
TU125034 lncRNA downstream 33478 3165682 ~ 3172182 (+) True G92786
XM_039811247.1 mRNA upstream 123350 2999620 ~ 3002539 (+) True LOC120565438
XM_039811246.1 mRNA upstream 266771 2845744 ~ 2859118 (+) True LOC120565437
XM_039811225.1 mRNA upstream 285030 2821642 ~ 2840859 (+) True LOC120565422
XM_039811224.1 mRNA upstream 531906 2586515 ~ 2593983 (+) True LOC120565421
XM_039811240.1 mRNA upstream 664292 2450531 ~ 2461597 (+) True LOC120565432
XM_039811502.1 mRNA downstream 85522 3217726 ~ 3574149 (+) True LOC120565597
XM_039811258.1 mRNA downstream 205628 3337832 ~ 3348216 (+) True LOC120565455
XM_039812269.1 mRNA downstream 497980 3630184 ~ 3633365 (+) True LOC120566051
XM_039812272.1 mRNA downstream 497980 3630184 ~ 3633365 (+) False LOC120566051
XM_039812271.1 mRNA downstream 497980 3630184 ~ 3633365 (+) False LOC120566051
TU124988 other upstream 31479 3011766 ~ 3094410 (+) True G92773
TU124992 other upstream 31479 3011766 ~ 3094410 (+) False G92773
TU124998 other upstream 111036 3010674 ~ 3014853 (+) False G92773
TU124983 other upstream 142875 2982226 ~ 2983014 (+) True G92770
TU124750 other upstream 543518 2533744 ~ 2582371 (+) True G92575
TU125102 other downstream 219563 3351767 ~ 3366729 (+) True G92826
TU125125 other downstream 353575 3485779 ~ 3490360 (+) True G92838
TU125164 other downstream 425793 3557997 ~ 3577980 (+) False LOC120565459
TU125178 other downstream 459901 3592105 ~ 3593384 (+) False LOC120565459
TU125177 other downstream 468774 3600978 ~ 3606825 (+) True G92848

Expression Profile