RNA id: TU125029


Basic Information

Item Value
RNA id TU125029
length 552
lncRNA type inter_gene
GC content 0.49
exon number 5
gene id G92784
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 3046489 ~ 3163010 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cacgcacagacacacacacagacacacagacagacagacagacagacagacagacagacagacagacagacatgcacgcacacagagacacacaaacacacacacagactaagagacacacaaacacacacacacagactaagagacacacaaacacacacacacagactaagagacacacacacacatacacagacaggcagagacacacacagacagacacacacagagacacacacacagacacacagacagacacacatacacacagagacagaaacacacacagacagaaacacacacacacagactgagacgcacacacacagacagacacacacacacagacagacacacacacacacacacacacagactgacacacagacagacagaaacacacacacacacacagagacagacacgaAAGTTTTGttccttttgtgtttgtgtcggaCAATAAAACGCACAAAGTCCAGTGTTCCTGACACTGTTACAGGTTCTTCCCAGGGGACTTGAATGCATCGCGGCCCTTCAGGCGAGACGGGACCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU125054 lncRNA upstream 23877 3109071 ~ 3109455 (+) True G92802
TU124986 lncRNA upstream 38922 3055994 ~ 3094410 (+) False G92773
TU124995 lncRNA upstream 45911 3015653 ~ 3087421 (+) False G92773
TU125034 lncRNA downstream 2808 3165682 ~ 3172182 (+) True G92786
TU125048 lncRNA downstream 23298 3186172 ~ 3186576 (+) False G92799
TU125085 lncRNA downstream 188893 3351767 ~ 3399599 (+) False G92826
TU125097 lncRNA downstream 188893 3351767 ~ 3353933 (+) False G92826
TU125106 lncRNA downstream 199218 3362092 ~ 3421936 (+) True G92827
XM_039811247.1 mRNA upstream 130793 2999620 ~ 3002539 (+) True LOC120565438
XM_039811246.1 mRNA upstream 274214 2845744 ~ 2859118 (+) True LOC120565437
XM_039811225.1 mRNA upstream 292473 2821642 ~ 2840859 (+) True LOC120565422
XM_039811224.1 mRNA upstream 539349 2586515 ~ 2593983 (+) True LOC120565421
XM_039811240.1 mRNA upstream 671735 2450531 ~ 2461597 (+) True LOC120565432
XM_039811502.1 mRNA downstream 54852 3217726 ~ 3574149 (+) True LOC120565597
XM_039811258.1 mRNA downstream 174958 3337832 ~ 3348216 (+) True LOC120565455
XM_039812269.1 mRNA downstream 467310 3630184 ~ 3633365 (+) True LOC120566051
XM_039812272.1 mRNA downstream 467310 3630184 ~ 3633365 (+) False LOC120566051
XM_039812271.1 mRNA downstream 467310 3630184 ~ 3633365 (+) False LOC120566051
TU125014 other upstream 1128 3125889 ~ 3132204 (+) True G92782
TU124988 other upstream 38922 3011766 ~ 3094410 (+) True G92773
TU124992 other upstream 38922 3011766 ~ 3094410 (+) False G92773
TU124998 other upstream 118479 3010674 ~ 3014853 (+) False G92773
TU124983 other upstream 150318 2982226 ~ 2983014 (+) True G92770
TU125102 other downstream 188893 3351767 ~ 3366729 (+) True G92826
TU125125 other downstream 322905 3485779 ~ 3490360 (+) True G92838
TU125164 other downstream 395123 3557997 ~ 3577980 (+) False LOC120565459
TU125178 other downstream 429231 3592105 ~ 3593384 (+) False LOC120565459
TU125177 other downstream 438104 3600978 ~ 3606825 (+) True G92848

Expression Profile