RNA id: TU125034


Basic Information

Item Value
RNA id TU125034
length 426
lncRNA type inter_gene
GC content 0.47
exon number 3
gene id G92786
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 3165682 ~ 3172182 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ctctcctctccatgGGCTCCTACAGTAGAAACCATCTGaaccagcaggtggcagcaaACGCTCAGAAACACAACAGACTcactgtgacacacacatacacacagacactggcCACCGCTGCATGATAGACACCATCTACTATTAATCATGTTATTAATTATAAAGGCATTTATCTCTCCACATCAGATGTGAGCCGGGGAATCTGaaccagcaggtggcagcaaacactctgaaacacacatacacacacacacatacacagagacacacatacacacacacacacacacagagacacacacagacacacacagagacacacacacacacacacagacacacacacacacacacagacagacagacagacacacacacacacacacacacacagacacacacacacacagacacacacacaaagac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU125025 lncRNA upstream 2672 3131064 ~ 3163010 (+) False G92784
TU125028 lncRNA upstream 2808 3046489 ~ 3162874 (+) False G92784
TU125023 lncRNA upstream 2808 3064817 ~ 3162874 (+) False G92784
TU125031 lncRNA upstream 2808 3075161 ~ 3162874 (+) False G92784
TU125021 lncRNA upstream 2808 3110437 ~ 3162874 (+) False G92784
TU125048 lncRNA downstream 13990 3186172 ~ 3186576 (+) False G92799
TU125085 lncRNA downstream 179585 3351767 ~ 3399599 (+) False G92826
TU125097 lncRNA downstream 179585 3351767 ~ 3353933 (+) False G92826
TU125106 lncRNA downstream 189910 3362092 ~ 3421936 (+) True G92827
TU125103 lncRNA downstream 227361 3399543 ~ 3464206 (+) False G92826
XM_039811247.1 mRNA upstream 163143 2999620 ~ 3002539 (+) True LOC120565438
XM_039811246.1 mRNA upstream 306564 2845744 ~ 2859118 (+) True LOC120565437
XM_039811225.1 mRNA upstream 324823 2821642 ~ 2840859 (+) True LOC120565422
XM_039811224.1 mRNA upstream 571699 2586515 ~ 2593983 (+) True LOC120565421
XM_039811240.1 mRNA upstream 704085 2450531 ~ 2461597 (+) True LOC120565432
XM_039811502.1 mRNA downstream 45544 3217726 ~ 3574149 (+) True LOC120565597
XM_039811258.1 mRNA downstream 165650 3337832 ~ 3348216 (+) True LOC120565455
XM_039812269.1 mRNA downstream 458002 3630184 ~ 3633365 (+) True LOC120566051
XM_039812272.1 mRNA downstream 458002 3630184 ~ 3633365 (+) False LOC120566051
XM_039812271.1 mRNA downstream 458002 3630184 ~ 3633365 (+) False LOC120566051
TU125014 other upstream 33478 3125889 ~ 3132204 (+) True G92782
TU124988 other upstream 71272 3011766 ~ 3094410 (+) True G92773
TU124992 other upstream 71272 3011766 ~ 3094410 (+) False G92773
TU124998 other upstream 150829 3010674 ~ 3014853 (+) False G92773
TU124983 other upstream 182668 2982226 ~ 2983014 (+) True G92770
TU125102 other downstream 179585 3351767 ~ 3366729 (+) True G92826
TU125125 other downstream 313597 3485779 ~ 3490360 (+) True G92838
TU125164 other downstream 385815 3557997 ~ 3577980 (+) False LOC120565459
TU125178 other downstream 419923 3592105 ~ 3593384 (+) False LOC120565459
TU125177 other downstream 428796 3600978 ~ 3606825 (+) True G92848

Expression Profile