RNA id: TU125055


Basic Information

Item Value
RNA id TU125055
length 268
lncRNA type inter_gene
GC content 0.45
exon number 3
gene id G92802
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 3109071 ~ 3150235 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cacacacacacacacacacacacacacaggttcgttgcactatctttgtggggacctgtcattgacataatgcattccctagccccttaccctaaccttaaccatcacaactaaatgcctaaccttaacccttaccctaaccctaaccttaaccatcacaactaaatgcctaaccttaacccttaccctaaccttaaccataacaagtaactacagccttgtaactgaagaCAGTTTTGGTCACCTACCCCATGCAggcctccagagt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU124986 lncRNA upstream 14661 3055994 ~ 3094410 (+) False G92773
TU124995 lncRNA upstream 21650 3015653 ~ 3087421 (+) False G92773
TU125034 lncRNA downstream 15447 3165682 ~ 3172182 (+) True G92786
TU125048 lncRNA downstream 35937 3186172 ~ 3186576 (+) False G92799
TU125085 lncRNA downstream 201532 3351767 ~ 3399599 (+) False G92826
TU125097 lncRNA downstream 201532 3351767 ~ 3353933 (+) False G92826
TU125106 lncRNA downstream 211857 3362092 ~ 3421936 (+) True G92827
XM_039811247.1 mRNA upstream 106532 2999620 ~ 3002539 (+) True LOC120565438
XM_039811246.1 mRNA upstream 249953 2845744 ~ 2859118 (+) True LOC120565437
XM_039811225.1 mRNA upstream 268212 2821642 ~ 2840859 (+) True LOC120565422
XM_039811224.1 mRNA upstream 515088 2586515 ~ 2593983 (+) True LOC120565421
XM_039811240.1 mRNA upstream 647474 2450531 ~ 2461597 (+) True LOC120565432
XM_039811502.1 mRNA downstream 67491 3217726 ~ 3574149 (+) True LOC120565597
XM_039811258.1 mRNA downstream 187597 3337832 ~ 3348216 (+) True LOC120565455
XM_039812269.1 mRNA downstream 479949 3630184 ~ 3633365 (+) True LOC120566051
XM_039812272.1 mRNA downstream 479949 3630184 ~ 3633365 (+) False LOC120566051
XM_039812271.1 mRNA downstream 479949 3630184 ~ 3633365 (+) False LOC120566051
TU124988 other upstream 14661 3011766 ~ 3094410 (+) True G92773
TU124992 other upstream 14661 3011766 ~ 3094410 (+) False G92773
TU124998 other upstream 94218 3010674 ~ 3014853 (+) False G92773
TU124983 other upstream 126057 2982226 ~ 2983014 (+) True G92770
TU124750 other upstream 526700 2533744 ~ 2582371 (+) True G92575
TU125102 other downstream 201532 3351767 ~ 3366729 (+) True G92826
TU125125 other downstream 335544 3485779 ~ 3490360 (+) True G92838
TU125164 other downstream 407762 3557997 ~ 3577980 (+) False LOC120565459
TU125178 other downstream 441870 3592105 ~ 3593384 (+) False LOC120565459
TU125177 other downstream 450743 3600978 ~ 3606825 (+) True G92848

Expression Profile