RNA id: TU125182


Basic Information

Item Value
RNA id TU125182
length 324
lncRNA type inter_gene
GC content 0.49
exon number 3
gene id G92853
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 3602367 ~ 3619368 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtgtgtctgtgtgtgtgtgtttgtgtgtctgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtctctgtgtgtgtatgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtctctgtgtctgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtctctgtgtctgtgtgtgt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU125172 lncRNA upstream 6979 3540034 ~ 3595388 (+) False LOC120565459
TU125173 lncRNA upstream 6979 3566481 ~ 3595388 (+) True LOC120565459
TU125167 lncRNA upstream 6979 3578113 ~ 3595388 (+) False LOC120565459
TU125163 lncRNA upstream 6979 3578272 ~ 3595388 (+) False LOC120565459
XR_005640253.1 lncRNA upstream 9517 3575647 ~ 3592850 (+) False LOC120565459
TU125179 lncRNA downstream 699 3620067 ~ 3625935 (+) True G92850
TU125220 lncRNA downstream 24921 3644289 ~ 3647676 (+) True G92881
TU125239 lncRNA downstream 63005 3682373 ~ 3702717 (+) True G92883
TU125243 lncRNA downstream 97737 3717105 ~ 3731760 (+) True G92885
TU125245 lncRNA downstream 143704 3763072 ~ 3769824 (+) True G92886
XM_039811502.1 mRNA upstream 28218 3217726 ~ 3574149 (+) True LOC120565597
XM_039811258.1 mRNA upstream 254151 3337832 ~ 3348216 (+) True LOC120565455
XM_039811247.1 mRNA upstream 599828 2999620 ~ 3002539 (+) True LOC120565438
XM_039811246.1 mRNA upstream 743249 2845744 ~ 2859118 (+) True LOC120565437
XM_039811225.1 mRNA upstream 761508 2821642 ~ 2840859 (+) True LOC120565422
XM_039812269.1 mRNA downstream 10816 3630184 ~ 3633365 (+) True LOC120566051
XM_039812272.1 mRNA downstream 10816 3630184 ~ 3633365 (+) False LOC120566051
XM_039812271.1 mRNA downstream 10816 3630184 ~ 3633365 (+) False LOC120566051
XM_039811503.1 mRNA downstream 95551 3714919 ~ 3823782 (+) True frem1b
XM_039811967.1 mRNA downstream 207495 3826863 ~ 3854810 (+) True LOC120565880
TU125178 other upstream 8983 3592105 ~ 3593384 (+) False LOC120565459
TU125164 other upstream 24387 3557997 ~ 3577980 (+) False LOC120565459
TU125125 other upstream 112007 3485779 ~ 3490360 (+) True G92838
TU125102 other upstream 235638 3351767 ~ 3366729 (+) True G92826
TU125014 other upstream 470163 3125889 ~ 3132204 (+) True G92782
TU125669 other downstream 577456 4196824 ~ 4217826 (+) True G93150
TU125644 other downstream 665534 4284902 ~ 4297410 (+) True LOC120565391
XR_005640230.1 other downstream 670973 4290341 ~ 4293890 (+) False LOC120565391
TU125908 other downstream 1092193 4711561 ~ 4713185 (+) False trmt1l
TU126315 other downstream 2416001 6035369 ~ 6040119 (+) False G93613

Expression Profile