RNA id: TU125210


Basic Information

Item Value
RNA id TU125210
length 236
lncRNA type sense_over
GC content 0.52
exon number 4
gene id G92875
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 3568719 ~ 3586637 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gcccacacacacacacacaccaaatagcccacacagacacacacacacacacacacacacacacacacacacacacacacacaccaaccatagcccacacacacacacacacacaccaaccatagcccacacagacacacacacacacacacaccaaccatagcccacacagacacacacacacacacacacacacacacaccaactatagcccacacacacacacacacacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU125150 lncRNA upstream 5260 3496835 ~ 3563459 (+) False G92845
TU125159 lncRNA upstream 5260 3496835 ~ 3563459 (+) False G92845
TU125149 lncRNA upstream 5260 3561035 ~ 3563459 (+) False G92845
TU125157 lncRNA upstream 5260 3561035 ~ 3563459 (+) False G92845
TU125143 lncRNA upstream 5260 3562140 ~ 3563459 (+) False G92845
TU125182 lncRNA downstream 16148 3602367 ~ 3619368 (+) True G92853
TU125215 lncRNA downstream 16570 3602789 ~ 3603330 (+) True G92878
TU125216 lncRNA downstream 21092 3607311 ~ 3613096 (+) True G92879
TU125179 lncRNA downstream 33848 3620067 ~ 3625935 (+) True G92850
TU125220 lncRNA downstream 58070 3644289 ~ 3647676 (+) True G92881
XM_039811258.1 mRNA upstream 220503 3337832 ~ 3348216 (+) True LOC120565455
XM_039811247.1 mRNA upstream 566180 2999620 ~ 3002539 (+) True LOC120565438
XM_039811246.1 mRNA upstream 709601 2845744 ~ 2859118 (+) True LOC120565437
XM_039811225.1 mRNA upstream 727860 2821642 ~ 2840859 (+) True LOC120565422
XM_039811224.1 mRNA upstream 974736 2586515 ~ 2593983 (+) True LOC120565421
XM_039812269.1 mRNA downstream 43965 3630184 ~ 3633365 (+) True LOC120566051
XM_039812272.1 mRNA downstream 43965 3630184 ~ 3633365 (+) False LOC120566051
XM_039812271.1 mRNA downstream 43965 3630184 ~ 3633365 (+) False LOC120566051
XM_039811503.1 mRNA downstream 128700 3714919 ~ 3823782 (+) True frem1b
XM_039811967.1 mRNA downstream 240644 3826863 ~ 3854810 (+) True LOC120565880
TU125125 other upstream 78359 3485779 ~ 3490360 (+) True G92838
TU125102 other upstream 201990 3351767 ~ 3366729 (+) True G92826
TU125014 other upstream 436515 3125889 ~ 3132204 (+) True G92782
TU124988 other upstream 474309 3011766 ~ 3094410 (+) True G92773
TU125178 other downstream 5886 3592105 ~ 3593384 (+) False LOC120565459
TU125177 other downstream 14759 3600978 ~ 3606825 (+) True G92848
TU125669 other downstream 610605 4196824 ~ 4217826 (+) True G93150
TU125644 other downstream 698683 4284902 ~ 4297410 (+) True LOC120565391
XR_005640230.1 other downstream 704122 4290341 ~ 4293890 (+) False LOC120565391

Expression Profile