RNA id: TU125667


Basic Information

Item Value
RNA id TU125667
length 387
lncRNA type inter_gene
GC content 0.42
exon number 2
gene id G93149
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 4179115 ~ 4187462 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

taataaatgataattatatttggactataGCGAAAATTAAACAGTTTAAAATGAtctaagacctagaacacaataggCCTACTTCAGTGAATTTAACACATTTACTAATCTGGGCTCCACATCTCTTCTGTTTTTCTAGTTAACTGCAGCGCTGTCTTGGATCTCAAGGACCGTCTCCCAACCACTGTGAACGCCACGCTGACCTGCTTCACTGAGAATTGGTGTCCGTCCGAGCTGACGCTAGGTCTGATGTTTGTCGgcagttttcttcttcttggagTCGCCATCTTCGGGGGTCTGTACTTCTGGAAAACCTACAAACACAGAAGACGAGAATCTACGGAAGGGAGAGCTTCATACACTCCTGCAAAAAACcagattatataa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU125670 lncRNA upstream 10391 4168321 ~ 4168724 (+) False G93151
TU125636 lncRNA upstream 75247 4102854 ~ 4103868 (+) True G93128
TU125281 lncRNA upstream 152844 3980907 ~ 4026271 (+) True G92915
TU125260 lncRNA upstream 254816 3865706 ~ 3924299 (+) True G92894
XR_005640231.1 lncRNA downstream 48346 4235808 ~ 4240337 (+) True LOC120565405
TU125686 lncRNA downstream 48362 4235824 ~ 4265365 (+) False LOC120565405
TU125694 lncRNA downstream 93989 4281451 ~ 4299758 (+) True G93170
TU125691 lncRNA downstream 95407 4282869 ~ 4283295 (+) True G93169
XR_005640233.1 lncRNA downstream 145499 4332961 ~ 4340598 (+) True LOC120565406
XM_039811210.1 mRNA upstream 17673 4160909 ~ 4161442 (+) True LOC120565402
XM_039811213.1 mRNA upstream 28112 4146493 ~ 4151003 (+) True LOC120565404
XM_039811205.1 mRNA upstream 37009 4141578 ~ 4142106 (+) True LOC120565396
XM_039811203.1 mRNA upstream 46542 4131863 ~ 4132573 (+) True LOC120565394
XM_039811967.1 mRNA upstream 324305 3826863 ~ 3854810 (+) True LOC120565880
XM_039811193.1 mRNA downstream 97293 4284755 ~ 4294092 (+) False LOC120565391
XM_039811196.1 mRNA downstream 97302 4284764 ~ 4305130 (+) False LOC120565391
XM_039811198.1 mRNA downstream 114161 4301623 ~ 4313515 (+) False LOC120565391
XM_039811194.1 mRNA downstream 114161 4301623 ~ 4313515 (+) False LOC120565391
XM_039811195.1 mRNA downstream 114161 4301623 ~ 4313515 (+) False LOC120565391
TU125177 other upstream 572290 3600978 ~ 3606825 (+) True G92848
TU125178 other upstream 585731 3592105 ~ 3593384 (+) False LOC120565459
TU125164 other upstream 601135 3557997 ~ 3577980 (+) False LOC120565459
TU125125 other upstream 688755 3485779 ~ 3490360 (+) True G92838
TU125102 other upstream 812386 3351767 ~ 3366729 (+) True G92826
TU125669 other downstream 9362 4196824 ~ 4217826 (+) True G93150
TU125644 other downstream 97440 4284902 ~ 4297410 (+) True LOC120565391
XR_005640230.1 other downstream 102879 4290341 ~ 4293890 (+) False LOC120565391
TU125908 other downstream 524099 4711561 ~ 4713185 (+) False trmt1l
TU126315 other downstream 1847907 6035369 ~ 6040119 (+) False G93613

Expression Profile