RNA id: TU125691


Basic Information

Item Value
RNA id TU125691
length 244
lncRNA type inter_gene
GC content 0.40
exon number 2
gene id G93169
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 4282869 ~ 4283295 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tacacacacacacacacacacacacacacacacacacacatacagacacacacacacacacacacacacacacacacacagacacacacatacacacacacacacacacatatgacacacacacacacacacacactcacacacatttctttGCTGATAGTCCCGGTGCTGTAAGCAAACACCTTTTCATCATcagctatttttattattttttgcttcttatgtttgttattatattttaaaC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU125686 lncRNA upstream 17504 4235824 ~ 4265365 (+) False LOC120565405
XR_005640231.1 lncRNA upstream 42532 4235808 ~ 4240337 (+) True LOC120565405
TU125668 lncRNA upstream 65043 4174602 ~ 4217826 (+) False G93150
TU125671 lncRNA upstream 84897 4168321 ~ 4197972 (+) True G93151
XR_005640233.1 lncRNA downstream 49666 4332961 ~ 4340598 (+) True LOC120565406
XR_005640232.1 lncRNA downstream 50016 4333311 ~ 4340598 (+) False LOC120565406
TU125717 lncRNA downstream 71447 4354742 ~ 4376530 (+) True G93191
TU125836 lncRNA downstream 129966 4413261 ~ 4413921 (+) True G93281
TU125861 lncRNA downstream 176976 4460271 ~ 4465434 (+) True G93294
XM_039811210.1 mRNA upstream 121427 4160909 ~ 4161442 (+) True LOC120565402
XM_039811213.1 mRNA upstream 131866 4146493 ~ 4151003 (+) True LOC120565404
XM_039811205.1 mRNA upstream 140763 4141578 ~ 4142106 (+) True LOC120565396
XM_039811203.1 mRNA upstream 150296 4131863 ~ 4132573 (+) True LOC120565394
XM_039811967.1 mRNA upstream 428059 3826863 ~ 3854810 (+) True LOC120565880
XM_039811193.1 mRNA downstream 1460 4284755 ~ 4294092 (+) False LOC120565391
XM_039811196.1 mRNA downstream 1469 4284764 ~ 4305130 (+) False LOC120565391
XM_039811198.1 mRNA downstream 18328 4301623 ~ 4313515 (+) False LOC120565391
XM_039811194.1 mRNA downstream 18328 4301623 ~ 4313515 (+) False LOC120565391
XM_039811195.1 mRNA downstream 18328 4301623 ~ 4313515 (+) False LOC120565391
TU125669 other upstream 65043 4196824 ~ 4217826 (+) True G93150
TU125177 other upstream 676044 3600978 ~ 3606825 (+) True G92848
TU125178 other upstream 689485 3592105 ~ 3593384 (+) False LOC120565459
TU125164 other upstream 704889 3557997 ~ 3577980 (+) False LOC120565459
TU125125 other upstream 792509 3485779 ~ 3490360 (+) True G92838
TU125644 other downstream 1607 4284902 ~ 4297410 (+) True LOC120565391
XR_005640230.1 other downstream 7046 4290341 ~ 4293890 (+) False LOC120565391
TU125908 other downstream 428266 4711561 ~ 4713185 (+) False trmt1l
TU126315 other downstream 1752074 6035369 ~ 6040119 (+) False G93613
TU126347 other downstream 1918790 6202085 ~ 6214017 (+) True G93638

Expression Profile