RNA id: TU125910


Basic Information

Item Value
RNA id TU125910
length 706
lncRNA type read_through
GC content 0.44
exon number 2
gene id G93327
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 4711274 ~ 4785944 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

agggtatgtgatgatgtgggggtatggtgaagggtatgtgatgatgtgggggtatggtgaagggtatgtgatgatgtgggggtatggtgaagggtatgtgatgatgtggggatattttaatatattagaCCTTGATAAACACAGCTTCCATGTTAAAGCTTACGCACATTGTGTCTCCTTAATGTGATTGTTTTAGAAGGAAAGTGAAGAAGTAAAGCTCAGTAAAGTGCCTTTACAGTACCTCCATGTTGCATCGCGCGCCGTAACGGGAACCAGCTTCCGTCGAGGGACGATGCGGTTGCCGTGGAGACCGGTCCGAGGGCTGAACACCTGCTGCTTTCTACCTGCGCCGTGGTTAGTGGGACAGTTTACAGCGCCAGCGCAACATTGTGTGGAGatatgaataataaaataaaagtctaCGTGAACTCTCCACTCTCTGCTTTCAACGTTGGGAAAACAACCCAAACTAATGGTTTTATTTGccaataaaacacaaatacagcacCAGGCTTTGATTATTTacggttttattttttgtaaccGATCGCAGACACACtgagtggagaaaaaaaaatctaaaacctGCAAGTAATCCAACATCTGTGACACATTAAGTACTAAACAGAGTTTGACTACAATGGCATGCCGTCCATTTGGTTGAAAGATGTCGTATGTCAGCAGTGCTGCAGGCTCATCAAGGACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU125881 lncRNA upstream 104481 4592376 ~ 4606793 (+) True G93308
TU125841 lncRNA upstream 205300 4500549 ~ 4505974 (+) True G93286
TU125842 lncRNA upstream 205300 4500549 ~ 4505974 (+) False G93286
TU125852 lncRNA upstream 209222 4496053 ~ 4502052 (+) True G93288
TU125859 lncRNA upstream 243963 4461129 ~ 4467311 (+) True G93293
TU125920 lncRNA downstream 12467 4798411 ~ 4805232 (+) True G93335
TU125930 lncRNA downstream 107374 4893318 ~ 4893706 (+) True G93345
TU125933 lncRNA downstream 148127 4934071 ~ 4993591 (+) True G93348
TU125934 lncRNA downstream 153204 4939148 ~ 4939410 (+) True G93349
TU125935 lncRNA downstream 157701 4943645 ~ 4943947 (+) True G93350
XM_039811615.1 mRNA upstream 49089 4657761 ~ 4662185 (+) True LOC120565686
XM_039811612.1 mRNA upstream 49837 4657761 ~ 4661437 (+) False LOC120565686
XM_039811614.1 mRNA upstream 49837 4657761 ~ 4661437 (+) False LOC120565686
XM_039811606.1 mRNA upstream 108121 4599472 ~ 4603153 (+) True LOC120565681
XM_039811598.1 mRNA upstream 191681 4515052 ~ 4519593 (+) False LOC120565674
XM_039812521.1 mRNA downstream 67004 4852948 ~ 4873356 (+) True mettl11b
XM_039812508.1 mRNA downstream 148817 4934761 ~ 4946307 (+) True gorab
XM_039812509.1 mRNA downstream 180615 4966559 ~ 5000440 (+) True prrx1b
XM_039812511.1 mRNA downstream 180615 4966559 ~ 5000440 (+) False prrx1b
XM_039812510.1 mRNA downstream 180615 4966559 ~ 5000440 (+) False prrx1b
TU125644 other upstream 413864 4284902 ~ 4297410 (+) True LOC120565391
XR_005640230.1 other upstream 417384 4290341 ~ 4293890 (+) False LOC120565391
TU125669 other upstream 493448 4196824 ~ 4217826 (+) True G93150
TU125177 other upstream 1104449 3600978 ~ 3606825 (+) True G92848
TU125178 other upstream 1117890 3592105 ~ 3593384 (+) False LOC120565459
TU126315 other downstream 1249425 6035369 ~ 6040119 (+) False G93613
TU126347 other downstream 1416141 6202085 ~ 6214017 (+) True G93638
TU126420 other downstream 1568953 6354897 ~ 6368354 (+) False rhpn1
TU126750 other downstream 2563866 7349810 ~ 7350587 (+) True G93938
TU126885 other downstream 3112728 7898672 ~ 7905247 (+) False LOC120565614

Expression Profile