RNA id: TU126066


Basic Information

Item Value
RNA id TU126066
length 263
lncRNA type intronic
GC content 0.50
exon number 2
gene id G93431
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 5058606 ~ 5100316 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ggttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtctgtctgtctctctgtctgtctgtgtgtgtgtgtgtgtacatgtgtgtgcgtgcatctgtctgtctgtctgtctgtctgtgtgtgcgtgtgcatgtgtgtttgcatatgcgtgtgtatgtgtgtacatgtgtacatgtgtgtgcatgcgtctgtctctgtctgtgtgtacgtgtgtgcgtctgtctgtctgtctg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU125933 lncRNA upstream 65015 4934071 ~ 4993591 (+) True G93348
TU125935 lncRNA upstream 114659 4943645 ~ 4943947 (+) True G93350
TU125937 lncRNA upstream 114659 4943645 ~ 4943947 (+) False G93350
TU125934 lncRNA upstream 119196 4939148 ~ 4939410 (+) True G93349
TU125930 lncRNA upstream 164900 4893318 ~ 4893706 (+) True G93345
TU126108 lncRNA downstream 227669 5327985 ~ 5328233 (+) True G93448
TU126099 lncRNA downstream 253028 5353344 ~ 5407242 (+) True G93439
TU126101 lncRNA downstream 299815 5400131 ~ 5411358 (+) True G93441
TU126122 lncRNA downstream 300501 5400817 ~ 5406747 (+) True G93462
TU126089 lncRNA downstream 387978 5488294 ~ 5492457 (+) True G93437
XM_039812509.1 mRNA upstream 58166 4966559 ~ 5000440 (+) True prrx1b
XM_039812511.1 mRNA upstream 58166 4966559 ~ 5000440 (+) False prrx1b
XM_039812510.1 mRNA upstream 58166 4966559 ~ 5000440 (+) False prrx1b
XM_039812512.1 mRNA upstream 58166 4966560 ~ 5000440 (+) False prrx1b
XM_039812514.1 mRNA upstream 58166 4966560 ~ 5000440 (+) False prrx1b
XM_039812491.1 mRNA downstream 26182 5126498 ~ 5201875 (+) False LOC120566192
XM_039812488.1 mRNA downstream 26182 5126498 ~ 5201874 (+) True LOC120566192
XM_039812493.1 mRNA downstream 26182 5126498 ~ 5201874 (+) False LOC120566192
XM_039812490.1 mRNA downstream 26182 5126498 ~ 5201874 (+) False LOC120566192
XM_039812489.1 mRNA downstream 26182 5126498 ~ 5201874 (+) False LOC120566192
TU125908 other upstream 345421 4711561 ~ 4713185 (+) False trmt1l
TU125644 other upstream 761196 4284902 ~ 4297410 (+) True LOC120565391
XR_005640230.1 other upstream 764716 4290341 ~ 4293890 (+) False LOC120565391
TU125669 other upstream 840780 4196824 ~ 4217826 (+) True G93150
TU125177 other upstream 1451781 3600978 ~ 3606825 (+) True G92848
TU126315 other downstream 935053 6035369 ~ 6040119 (+) False G93613
TU126347 other downstream 1101769 6202085 ~ 6214017 (+) True G93638
TU126420 other downstream 1254581 6354897 ~ 6368354 (+) False rhpn1
TU126750 other downstream 2249494 7349810 ~ 7350587 (+) True G93938
TU126885 other downstream 2798356 7898672 ~ 7905247 (+) False LOC120565614

Expression Profile