RNA id: TU126350


Basic Information

Item Value
RNA id TU126350
length 204
lncRNA type inter_gene
GC content 0.51
exon number 2
gene id G93640
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 6215068 ~ 6215735 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

agtatgagggcgtgccctgacagtacctaggtaaggactactagccagtcagaagcagagtatgagggcgtgccctgacagtacctatgtaaggactactagccagtcagaagcagagtatgagggcgtgccatgctagcagctaggcgagcattataacgtgtgttccaaagtgaccacgtttgtctctgaagtaaaggctgg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU126316 lncRNA upstream 163548 6035369 ~ 6051520 (+) False G93613
TU126314 lncRNA upstream 167346 6035369 ~ 6047722 (+) False G93613
TU126313 lncRNA upstream 176220 6035369 ~ 6038848 (+) True G93613
TU126307 lncRNA upstream 250009 5964812 ~ 5965059 (+) True G93609
TU126234 lncRNA upstream 554263 5596770 ~ 5660805 (+) True G93541
TU126357 lncRNA downstream 25460 6241195 ~ 6242158 (+) True G93644
TU126433 lncRNA downstream 174421 6390156 ~ 6398997 (+) True G93700
TU126449 lncRNA downstream 373468 6589203 ~ 6589653 (+) True G93713
TU126505 lncRNA downstream 620856 6836591 ~ 6836818 (+) True G93758
TU126542 lncRNA downstream 660416 6876151 ~ 6876493 (+) True G93790
XM_039811753.1 mRNA upstream 143821 6067683 ~ 6071247 (+) True LOC120565748
XM_039811550.1 mRNA upstream 185875 6002811 ~ 6029193 (+) True LOC120565642
XM_039812503.1 mRNA upstream 728183 5342166 ~ 5486885 (+) False mast2
XM_039811499.1 mRNA downstream 46485 6262220 ~ 6290119 (+) True tut4
XM_039811775.1 mRNA downstream 120016 6335751 ~ 6345081 (+) True LOC120565762
XM_039812355.1 mRNA downstream 139157 6354892 ~ 6381598 (+) True rhpn1
XM_039811997.1 mRNA downstream 411907 6627642 ~ 6641120 (+) True cyldl
XM_039810252.1 mRNA downstream 456336 6672071 ~ 6723277 (+) True ghrhrb
TU126347 other upstream 1051 6202085 ~ 6214017 (+) True G93638
TU126315 other upstream 174949 6035369 ~ 6040119 (+) False G93613
TU125908 other upstream 1501883 4711561 ~ 4713185 (+) False trmt1l
TU125644 other upstream 1917658 4284902 ~ 4297410 (+) True LOC120565391
XR_005640230.1 other upstream 1921178 4290341 ~ 4293890 (+) False LOC120565391
TU126420 other downstream 139162 6354897 ~ 6368354 (+) False rhpn1
TU126750 other downstream 1134075 7349810 ~ 7350587 (+) True G93938
TU126885 other downstream 1682937 7898672 ~ 7905247 (+) False LOC120565614
TU126919 other downstream 2021635 8237370 ~ 8245821 (+) False G94073
TU126920 other downstream 2021635 8237370 ~ 8254575 (+) True G94073

Expression Profile