RNA id: TU126742


Basic Information

Item Value
RNA id TU126742
length 478
lncRNA type inter_gene
GC content 0.55
exon number 3
gene id G93931
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 7318842 ~ 7321455 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ACCTTTTCTTTTACCCTCTTTTTCTGCTCCGCTTTTCGTTTATCCTCTTCGCGCCTCCTGGCCTCTTCTTTGAGCCTCCTGGCCTCGTCTTCTCGCCTCCTGGCCTCCTCTTCGCGCATCCTGGCCTCCTCTTCGCGCCTCCTGGCCTCCTCTTCGCGCTTCCTGGCCTCCTCTTTGCGCCTCCTGGCCTCCTCTTCTATCAGCTGTTGTTGGTGTTGCTGCTTGGATGCCTGCTGCACTTCTATATGTTCCTGTTGTGCAATGTAAGTCGGCAGCTGCACCACTATTTGCTCATAGTGGTCCTGGGCTTCGGTGAACTGGTTCTCGATGCCTCTCTTGTCGTCGTCGGTAAACATCTGGGAGCCGTGGCTGTTCACTCGGAACTCCTCGTAGTGAGTCTCCAGGCTCTTGATAAGTTGGCGGTATTCCTCAGGACGCATGCTGgacagCATGCTGATGGTGAGGGAGTTGATTTTTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU126703 lncRNA upstream 31689 7271936 ~ 7287153 (+) True G93912
TU126682 lncRNA upstream 83123 7233146 ~ 7235719 (+) True G93906
TU126671 lncRNA upstream 162123 7156335 ~ 7156719 (+) True G93896
TU126663 lncRNA upstream 184410 7131348 ~ 7134432 (+) True G93888
TU126620 lncRNA upstream 188091 7127314 ~ 7130751 (+) True G93851
TU126743 lncRNA downstream 611 7322066 ~ 7323426 (+) True G93932
TU126744 lncRNA downstream 5716 7327171 ~ 7327686 (+) True G93933
XR_005640327.1 lncRNA downstream 72918 7394373 ~ 7395278 (+) True LOC120566054
TU126801 lncRNA downstream 203535 7524990 ~ 7525343 (+) True G93985
TU126802 lncRNA downstream 235799 7557254 ~ 7615427 (+) True G93986
XM_039811515.1 mRNA upstream 33083 7263547 ~ 7285759 (+) True LOC120565613
XM_039811275.1 mRNA upstream 191570 7108149 ~ 7127272 (+) True igfbp3
XM_039811274.1 mRNA upstream 250908 7007170 ~ 7067934 (+) True si:ch211-191a24.3
XM_039811272.1 mRNA upstream 347542 6965547 ~ 6971300 (+) True si:ch211-191a24.4
XM_039810252.1 mRNA upstream 595565 6672071 ~ 6723277 (+) True ghrhrb
XM_039811822.1 mRNA downstream 32393 7353848 ~ 7379344 (+) True LOC120565797
XM_039812274.1 mRNA downstream 76683 7398138 ~ 7413692 (+) True LOC120566053
XM_039812276.1 mRNA downstream 76685 7398140 ~ 7413692 (+) False LOC120566053
XM_039812533.1 mRNA downstream 93986 7415441 ~ 7423820 (+) True LOC120566212
XM_039812332.1 mRNA downstream 258737 7580192 ~ 7581837 (+) True foxq1b
TU126420 other upstream 950488 6354897 ~ 6368354 (+) False rhpn1
TU126347 other upstream 1104825 6202085 ~ 6214017 (+) True G93638
TU126315 other upstream 1278723 6035369 ~ 6040119 (+) False G93613
TU125908 other upstream 2605657 4711561 ~ 4713185 (+) False trmt1l
XR_005640230.1 other upstream 3024952 4290341 ~ 4293890 (+) False LOC120565391
TU126750 other downstream 28355 7349810 ~ 7350587 (+) True G93938
TU126885 other downstream 577217 7898672 ~ 7905247 (+) False LOC120565614
TU126919 other downstream 915915 8237370 ~ 8245821 (+) False G94073
TU126920 other downstream 915915 8237370 ~ 8254575 (+) True G94073
TU127064 other downstream 1825707 9147162 ~ 9159695 (+) True G94199

Expression Profile