RNA id: TU126750


Basic Information

Item Value
RNA id TU126750
length 778
RNA type TUCP
GC content 0.40
exon number 1
gene id G93938
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 7349810 ~ 7350587 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

catatatacattttttaatgttttgccctgttaattaaaggccttttatcactttttgtaaccaaccctgatgaaatgtttttttaatgacttcaTTAGTTATAATTCTTCCTCCTTTTCTGTGTACTTTATTCCCTTCCGTCACCGGTGGTTAAAAGGATACCAGAAGTGCTCCtgcaacttttttctttttttttttccatatacaAAATAGTTGTTAGTATAAGAAAAAGGAGGCTATCTTCTATGGGTATCTTCTATGCTGCTGTGTGCTGGGGACGGAGTGTGAGGGCGAGAGACGCTAACAagcttaaaggagaaatcccgcgcaaaatgaacctaggggttaataacacatgtgtaccaagtcgactggtcgtgactgttttcccaagatggcgcccgtaTGTATACGTAAacagtactgtctttataaactatctttttaataaactgtctgtacacttacaaagttctcaatgcttcggtttacatgtagggaccctcattatgctaccgtggaagtctGGTGCTGTTTTGAGGCTTGTAAGTGGGatagaaatagtgatttctttttactttaccctctgcacCAAagactagcgttgtaagctaattagcggtttgtgcTAAAACTGGTCCCATTCGTTTAGCAttaaacaaatcccagagaacaATCGACTCGGTACCCATTGTGTTATGAACCACTAGGTTAAttttttgcgccggaattgccCTTTAACAAGCCAGTTAGGAGGGCCGGCTCAGTGATTGGAGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU126744 lncRNA upstream 22124 7327171 ~ 7327686 (+) True G93933
TU126743 lncRNA upstream 26384 7322066 ~ 7323426 (+) True G93932
TU126742 lncRNA upstream 28355 7318842 ~ 7321455 (+) True G93931
TU126703 lncRNA upstream 62657 7271936 ~ 7287153 (+) True G93912
TU126682 lncRNA upstream 114091 7233146 ~ 7235719 (+) True G93906
XR_005640327.1 lncRNA downstream 43786 7394373 ~ 7395278 (+) True LOC120566054
TU126801 lncRNA downstream 174403 7524990 ~ 7525343 (+) True G93985
TU126802 lncRNA downstream 206667 7557254 ~ 7615427 (+) True G93986
TU126854 lncRNA downstream 528332 7878919 ~ 7883828 (+) False LOC120565294
TU126855 lncRNA downstream 529951 7880538 ~ 7883828 (+) False LOC120565294
XM_039811515.1 mRNA upstream 64051 7263547 ~ 7285759 (+) True LOC120565613
XM_039811275.1 mRNA upstream 222538 7108149 ~ 7127272 (+) True igfbp3
XM_039811274.1 mRNA upstream 281876 7007170 ~ 7067934 (+) True si:ch211-191a24.3
XM_039811272.1 mRNA upstream 378510 6965547 ~ 6971300 (+) True si:ch211-191a24.4
XM_039810252.1 mRNA upstream 626533 6672071 ~ 6723277 (+) True ghrhrb
XM_039811822.1 mRNA downstream 3261 7353848 ~ 7379344 (+) True LOC120565797
XM_039812274.1 mRNA downstream 47551 7398138 ~ 7413692 (+) True LOC120566053
XM_039812276.1 mRNA downstream 47553 7398140 ~ 7413692 (+) False LOC120566053
XM_039812533.1 mRNA downstream 64854 7415441 ~ 7423820 (+) True LOC120566212
XM_039812332.1 mRNA downstream 229605 7580192 ~ 7581837 (+) True foxq1b
TU126420 other upstream 981456 6354897 ~ 6368354 (+) False rhpn1
TU126347 other upstream 1135793 6202085 ~ 6214017 (+) True G93638
TU126315 other upstream 1309691 6035369 ~ 6040119 (+) False G93613
TU125908 other upstream 2636625 4711561 ~ 4713185 (+) False trmt1l
TU125644 other upstream 3052400 4284902 ~ 4297410 (+) True LOC120565391
TU126885 other downstream 548085 7898672 ~ 7905247 (+) False LOC120565614
TU126919 other downstream 886783 8237370 ~ 8245821 (+) False G94073
TU126920 other downstream 886783 8237370 ~ 8254575 (+) True G94073
TU127064 other downstream 1796575 9147162 ~ 9159695 (+) True G94199
TU127128 other downstream 2201709 9552296 ~ 9557568 (+) True G94239

Expression Profile