RNA id: TU127024


Basic Information

Item Value
RNA id TU127024
length 298
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G94167
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 9000163 ~ 9000460 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tcttataaagctaacaacggtgtccgatttcaatttaatgaatatttgtgaaaactaggtgtttcgttagctgcgactgtcccttcaatcctagctatgtgtagctacaaaccacggatagttagcttccttttcgccttaattcgattatatttagagtttgaatttcgtcacgccacttacacaacatctaaatatatgtcttataaacctaacaacggtgtccgatttcaatttaatgaatatttgtgaaaactaggtgtttcgttagctgcgactgtcccttcaatcctagcta

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU127009 lncRNA upstream 346739 8653056 ~ 8653424 (+) True G94153
TU127007 lncRNA upstream 384529 8614911 ~ 8615634 (+) True G94151
TU126921 lncRNA upstream 713727 8237370 ~ 8286436 (+) False G94073
TU126923 lncRNA upstream 720191 8278804 ~ 8279972 (+) True G94075
TU126914 lncRNA upstream 821680 8176269 ~ 8178483 (+) True G94068
TU127026 lncRNA downstream 996 9001456 ~ 9001706 (+) True G94169
TU127056 lncRNA downstream 89368 9089828 ~ 9096292 (+) True G94192
TU127065 lncRNA downstream 146702 9147162 ~ 9168877 (+) False G94199
TU127068 lncRNA downstream 168859 9169319 ~ 9169757 (+) True G94201
XR_005640321.1 lncRNA downstream 434261 9434721 ~ 9437621 (+) True LOC120566015
XM_039812447.1 mRNA upstream 785663 8208453 ~ 8214500 (+) True rgs4
XM_039811516.1 mRNA upstream 1095017 7896145 ~ 7905146 (+) True LOC120565614
XM_039810957.1 mRNA upstream 1109986 7880460 ~ 7890177 (+) True LOC120565294
XM_039810958.1 mRNA upstream 1126177 7868591 ~ 7873986 (+) True LOC120565295
XM_039810246.1 mRNA downstream 21057 9021517 ~ 9033680 (+) True LOC120564973
XM_039810130.1 mRNA downstream 56881 9057341 ~ 9062036 (+) True LOC120564878
XM_039812316.1 mRNA downstream 66718 9067178 ~ 9070676 (+) True LOC120566074
XM_039812315.1 mRNA downstream 66722 9067182 ~ 9070676 (+) False LOC120566074
XM_039810147.1 mRNA downstream 80399 9080859 ~ 9083857 (+) True LOC120564889
TU126920 other upstream 745588 8237370 ~ 8254575 (+) True G94073
TU126919 other upstream 754342 8237370 ~ 8245821 (+) False G94073
TU126885 other upstream 1094916 7898672 ~ 7905247 (+) False LOC120565614
TU126750 other upstream 1649576 7349810 ~ 7350587 (+) True G93938
TU126420 other upstream 2631809 6354897 ~ 6368354 (+) False rhpn1
TU127064 other downstream 146702 9147162 ~ 9159695 (+) True G94199
TU127128 other downstream 551836 9552296 ~ 9557568 (+) True G94239
unassigned_transcript_387 other downstream 571838 9572298 ~ 9572369 (+) True trnah-gug_12
TU127191 other downstream 817161 9817621 ~ 9879198 (+) True G94281
TU127195 other downstream 844289 9844749 ~ 9845804 (+) False LOC120565620

Expression Profile