Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU127112 |
| length | 480 |
| lncRNA type | read_through |
| GC content | 0.44 |
| exon number | 2 |
| gene id | LOC120566016 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053120.1 |
| NCBI id | CM020917.1 |
| chromosome length | 41568296 |
| location | 9493981 ~ 9495357 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0044421 | obsolete extracellular region part | cellular_component |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005615 | extracellular space | cellular_component |
| GO:0061783 | peptidoglycan muralytic activity | molecular_function |
| GO:0003796 | lysozyme activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU127117 | lncRNA | upstream | 8016 | 9484003 ~ 9485965 (+) | True | G94232 |
| XR_005640321.1 | lncRNA | upstream | 56360 | 9434721 ~ 9437621 (+) | True | LOC120566015 |
| TU127068 | lncRNA | upstream | 324224 | 9169319 ~ 9169757 (+) | True | G94201 |
| TU127065 | lncRNA | upstream | 325104 | 9147162 ~ 9168877 (+) | False | G94199 |
| TU127056 | lncRNA | upstream | 397689 | 9089828 ~ 9096292 (+) | True | G94192 |
| TU127116 | lncRNA | downstream | 45209 | 9540537 ~ 9541059 (+) | True | G94231 |
| TU127114 | lncRNA | downstream | 46139 | 9541467 ~ 9543494 (+) | False | LOC120566011 |
| TU127124 | lncRNA | downstream | 52386 | 9547714 ~ 9551691 (+) | True | G94238 |
| TU127153 | lncRNA | downstream | 166804 | 9662132 ~ 9672803 (+) | False | G94259 |
| TU127155 | lncRNA | downstream | 178103 | 9673431 ~ 9679737 (+) | True | G94259 |
| XM_039812213.1 | mRNA | upstream | 20607 | 9462445 ~ 9473374 (+) | True | LOC120566014 |
| XM_039812210.1 | mRNA | upstream | 42895 | 9406710 ~ 9451086 (+) | False | LOC120566012 |
| XM_039812212.1 | mRNA | upstream | 42895 | 9406710 ~ 9451086 (+) | False | LOC120566012 |
| XM_039812207.1 | mRNA | upstream | 42895 | 9406710 ~ 9451086 (+) | False | LOC120566012 |
| XM_039812211.1 | mRNA | upstream | 50032 | 9406710 ~ 9443949 (+) | False | LOC120566012 |
| XM_039812218.1 | mRNA | downstream | 79930 | 9575258 ~ 9587669 (+) | False | depdc1a |
| XM_039812217.1 | mRNA | downstream | 80108 | 9575436 ~ 9587669 (+) | True | depdc1a |
| XM_039812221.1 | mRNA | downstream | 93828 | 9589156 ~ 9603575 (+) | True | LOC120566020 |
| XM_039812222.1 | mRNA | downstream | 119467 | 9614795 ~ 9671788 (+) | True | fnbp1l |
| XM_039811520.1 | mRNA | downstream | 270748 | 9766076 ~ 9785140 (+) | True | hps3 |
| TU127064 | other | upstream | 334286 | 9147162 ~ 9159695 (+) | True | G94199 |
| TU126920 | other | upstream | 1239406 | 8237370 ~ 8254575 (+) | True | G94073 |
| TU126919 | other | upstream | 1248160 | 8237370 ~ 8245821 (+) | False | G94073 |
| TU126885 | other | upstream | 1588734 | 7898672 ~ 7905247 (+) | False | LOC120565614 |
| TU126750 | other | upstream | 2143394 | 7349810 ~ 7350587 (+) | True | G93938 |
| TU127128 | other | downstream | 56968 | 9552296 ~ 9557568 (+) | True | G94239 |
| unassigned_transcript_387 | other | downstream | 76970 | 9572298 ~ 9572369 (+) | True | trnah-gug_12 |
| TU127191 | other | downstream | 322293 | 9817621 ~ 9879198 (+) | True | G94281 |
| TU127195 | other | downstream | 349421 | 9844749 ~ 9845804 (+) | False | LOC120565620 |
| TU127196 | other | downstream | 349421 | 9844749 ~ 9845981 (+) | False | LOC120565620 |
