Item | Value |
---|---|
RNA id | TU128745 |
length | 1262 |
lncRNA type | read_through |
GC content | 0.33 |
exon number | 2 |
gene id | G95447 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_053120.1 |
NCBI id | CM020917.1 |
chromosome length | 41568296 |
location | 14546536 ~ 14639046 (+) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
species | eurasian perch (Perca fluviatilis) |
id | description |
---|---|
ko04744 | Phototransduction |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU128645 | lncRNA | upstream | 177310 | 14368922 ~ 14369226 (+) | True | G95372 |
TU128557 | lncRNA | upstream | 282650 | 14258285 ~ 14263886 (+) | False | LOC120565959 |
TU128558 | lncRNA | upstream | 282650 | 14258285 ~ 14263886 (+) | True | LOC120565959 |
XR_005640311.1 | lncRNA | upstream | 284644 | 14258356 ~ 14261892 (+) | False | LOC120565959 |
XR_005640310.1 | lncRNA | upstream | 284776 | 14258357 ~ 14261760 (+) | False | LOC120565959 |
TU128779 | lncRNA | downstream | 50336 | 14689382 ~ 14698562 (+) | False | LOC120565380 |
TU128778 | lncRNA | downstream | 56636 | 14695682 ~ 14698562 (+) | False | LOC120565380 |
TU128781 | lncRNA | downstream | 60504 | 14699550 ~ 14700145 (+) | False | LOC120565380 |
XR_005640293.1 | lncRNA | downstream | 148022 | 14787068 ~ 14791606 (+) | True | LOC120565827 |
TU128805 | lncRNA | downstream | 240036 | 14879082 ~ 14879287 (+) | True | G95492 |
XM_039812080.1 | mRNA | upstream | 2008 | 14537576 ~ 14544528 (+) | True | babam1 |
XM_039810587.1 | mRNA | upstream | 47962 | 14480454 ~ 14498574 (+) | True | si:ch73-61d6.3 |
XM_039810588.1 | mRNA | upstream | 47962 | 14482779 ~ 14498574 (+) | False | si:ch73-61d6.3 |
XM_039810580.1 | mRNA | upstream | 67469 | 14469044 ~ 14479067 (+) | True | mfsd12b |
XM_039810581.1 | mRNA | upstream | 67469 | 14469044 ~ 14479067 (+) | False | mfsd12b |
XM_039811168.1 | mRNA | downstream | 53458 | 14692504 ~ 14704353 (+) | True | LOC120565380 |
XM_039812299.1 | mRNA | downstream | 171323 | 14810369 ~ 14912885 (+) | False | dennd1b |
XM_039812295.1 | mRNA | downstream | 171324 | 14810370 ~ 14923845 (+) | True | dennd1b |
XM_039812296.1 | mRNA | downstream | 171324 | 14810370 ~ 14919627 (+) | False | dennd1b |
XM_039812297.1 | mRNA | downstream | 171324 | 14810370 ~ 14919627 (+) | False | dennd1b |
XR_005640172.1 | other | upstream | 1163792 | 13379398 ~ 13382744 (+) | True | LOC120564964 |
TU128204 | other | upstream | 1326164 | 13173025 ~ 13220372 (+) | True | G95046 |
XR_005640174.1 | other | upstream | 1446091 | 13005576 ~ 13100445 (+) | True | raver2 |
TU127781 | other | upstream | 3102003 | 11429031 ~ 11444533 (+) | False | LOC120565923 |
unassigned_transcript_388 | other | upstream | 3297889 | 11248575 ~ 11248647 (+) | True | trnam-cau_8 |
XR_005640328.1 | other | downstream | 171322 | 14810368 ~ 14916606 (+) | False | dennd1b |
XR_005640329.1 | other | downstream | 171322 | 14810368 ~ 14914033 (+) | False | dennd1b |
XR_005640269.1 | other | downstream | 1681448 | 16320494 ~ 16341048 (+) | False | kdm4b |
TU129832 | other | downstream | 3216591 | 17855637 ~ 17859152 (+) | False | nppc |
XR_005640350.1 | other | downstream | 3227502 | 17866548 ~ 17866681 (+) | True | LOC120566215 |