RNA id: TU129984


Basic Information

Item Value
RNA id TU129984
length 537
lncRNA type sense_over
GC content 0.48
exon number 1
gene id nmur1a
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 18646703 ~ 18665113 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

accaacccgacgcatgcgcgagacgtaatacgtctccataacagcaggcgacgctaatctgtattgtcacccaaaaaattaaaaccggaaatgacgaacgcgtcatgtgggtctggcttctccaacCGAAcataatggcggcttgttcgaaaTATGATcttgtattttacgaaaatagttcactgaaacatgtttctgaaaacattttacgcgagaaataggccatacagttgctgaatctgtcttcatttcagatcgacaaaggtcagtttaaaagatttttgtcagattttgagaggtatccgtcactcatcccgctcgtcatttccgggttagcactccaccaatcagattggtcattgagtccaactgcccgccctccgacccagcaagtcaggtcggctAAAACGAAGGCCAACGGCCCTCCGACAGActacggcacggaacacactgaacagacttgagtcactgacctcgccagactgtcggacggccgattatcaggttggtgtgtcagggcctttaagtGTTACAATG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU129986 lncRNA upstream 4696 18659642 ~ 18659881 (+) True G96372
TU129966 lncRNA upstream 43235 18619558 ~ 18621342 (+) True G96361
TU129967 lncRNA upstream 43235 18619558 ~ 18621342 (+) False G96361
TU129956 lncRNA upstream 51317 18613029 ~ 18613260 (+) True G96353
TU129944 lncRNA upstream 77612 18586628 ~ 18586965 (+) True G96341
TU130030 lncRNA downstream 79403 18744516 ~ 18744857 (+) True G96398
TU130032 lncRNA downstream 84007 18749120 ~ 18751861 (+) True G96399
TU130057 lncRNA downstream 117081 18782194 ~ 18859921 (+) True G96417
TU130082 lncRNA downstream 359170 19024283 ~ 19029464 (+) True G96438
TU130094 lncRNA downstream 391228 19056341 ~ 19057812 (+) True G96445
XM_039812053.1 mRNA upstream 722842 17928603 ~ 17941735 (+) True mfsd8l1
XM_039812057.1 mRNA upstream 724226 17928604 ~ 17940351 (+) False mfsd8l1
XM_039812055.1 mRNA upstream 724252 17928604 ~ 17940325 (+) False mfsd8l1
XM_039812054.1 mRNA upstream 724284 17928604 ~ 17940293 (+) False mfsd8l1
XM_039811848.1 mRNA upstream 737941 17920839 ~ 17926636 (+) False polr2h
XM_039812102.1 mRNA downstream 16957 18682070 ~ 18683397 (+) True LOC120565952
XM_039812101.1 mRNA downstream 19085 18684198 ~ 18685748 (+) True LOC120565951
XM_039811541.1 mRNA downstream 24106 18689219 ~ 18701367 (+) True LOC120565634
XM_039811542.1 mRNA downstream 36781 18701894 ~ 18712465 (+) True LOC120565635
XM_039810616.1 mRNA downstream 50641 18715754 ~ 18733910 (+) True LOC120565156
XR_005640349.1 other upstream 792166 17872278 ~ 17872411 (+) True LOC120566214
XR_005640363.1 other upstream 792730 17871710 ~ 17871847 (+) True LOC120566229
XR_005640362.1 other upstream 795775 17868666 ~ 17868802 (+) True LOC120566228
XR_005640350.1 other upstream 797896 17866548 ~ 17866681 (+) True LOC120566215
TU129832 other upstream 805425 17855637 ~ 17859152 (+) False nppc
TU130059 other downstream 117487 18782600 ~ 18785636 (+) True G96418
TU130185 other downstream 865654 19530767 ~ 19531677 (+) True G96513
TU131036 other downstream 3025784 21690897 ~ 21782000 (+) True G97093
TU131315 other downstream 3618533 22283646 ~ 22287272 (+) True G97321
XR_005640282.1 other downstream 3820398 22485511 ~ 22488103 (+) False LOC120565764

Expression Profile