RNA id: TU131036


Basic Information

Item Value
RNA id TU131036
length 429
RNA type TUCP
GC content 0.58
exon number 2
gene id G97093
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 21690897 ~ 21782000 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

aggaggaggaggaggaggaggaggaagaaaaatgcaacaacagGTCACACTCAGGGCTGTCGATGTACAGGGACTGGGTGCTGTCTTTGCGGCGGCCTGGGTGCTCCCTTCTCCTGACCGAGTACTTTAATGCTCCATTTCTAGGATTGGTACAAGTCGGAGCTGGACTTGAGGCCGCAGACTGGGAGAGGACGCCAGGCGGAAGTTTAACTGTGCCTGGGATGATGGGGTTGCGGCGTTGCAGCGGATGCCTGGAGGAGGCGGTGGATAACTCAGAGGCTGAAGAAACGCAGCTGGACAAAGAGGAGGTGGAGCTAGAAGGGGTGAGGCTTAGCAGAGAGACACGTCCACCAGGGACTTTAGGTCGCTGGGCCATGTCTGATGGTTTGGGCGGACAAGCTGGCCTGTATCTCCTCAGCAGGGAGCCAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU131003 lncRNA upstream 14548 21658550 ~ 21676349 (+) True G97064
TU131004 lncRNA upstream 14548 21658550 ~ 21676349 (+) False G97064
TU130979 lncRNA upstream 133166 21554953 ~ 21557731 (+) True lsm7
TU130980 lncRNA upstream 133166 21554953 ~ 21557731 (+) False lsm7
TU130923 lncRNA upstream 234097 21368118 ~ 21456800 (+) True G97009
TU131133 lncRNA downstream 159105 21941105 ~ 21942404 (+) True G97170
TU131132 lncRNA downstream 160965 21942965 ~ 21944561 (+) False G97170
TU131135 lncRNA downstream 162082 21944082 ~ 21944561 (+) False G97170
TU131148 lncRNA downstream 215413 21997413 ~ 21997743 (+) True G97181
XR_005640290.1 lncRNA downstream 223775 22005775 ~ 22007353 (+) True LOC120565815
XM_039811757.1 mRNA upstream 98747 21578985 ~ 21592150 (+) True enc3
XM_039811756.1 mRNA upstream 110053 21577394 ~ 21580844 (+) False enc3
XM_039810656.1 mRNA upstream 119098 21559203 ~ 21571799 (+) True tmprss9
XM_039810655.1 mRNA upstream 133171 21554894 ~ 21557726 (+) False lsm7
XM_039810654.1 mRNA upstream 138643 21539227 ~ 21552254 (+) False LOC120565175
XM_039810145.1 mRNA downstream 69042 21851042 ~ 21853412 (+) True s1pr4
XM_039810498.1 mRNA downstream 113470 21895470 ~ 21909198 (+) True ncln
XM_039810501.1 mRNA downstream 113470 21895470 ~ 21909198 (+) False ncln
XM_039810503.1 mRNA downstream 113470 21895470 ~ 21909198 (+) False ncln
XM_039810500.1 mRNA downstream 113470 21895470 ~ 21909198 (+) False ncln
TU130185 other upstream 2159220 19530767 ~ 19531677 (+) True G96513
TU130059 other upstream 2905261 18782600 ~ 18785636 (+) True G96418
XR_005640349.1 other upstream 3818486 17872278 ~ 17872411 (+) True LOC120566214
XR_005640363.1 other upstream 3819050 17871710 ~ 17871847 (+) True LOC120566229
XR_005640362.1 other upstream 3822095 17868666 ~ 17868802 (+) True LOC120566228
TU131315 other downstream 501646 22283646 ~ 22287272 (+) True G97321
XR_005640282.1 other downstream 703511 22485511 ~ 22488103 (+) False LOC120565764
XR_005640308.1 other downstream 710957 22492957 ~ 22501015 (+) False soat1
XR_005640352.1 other downstream 790059 22572059 ~ 22572139 (+) False LOC120566218
XR_005640361.1 other downstream 790469 22572469 ~ 22572551 (+) True LOC120566227

Expression Profile