RNA id: TU131439


Basic Information

Item Value
RNA id TU131439
length 216
lncRNA type intronic
GC content 0.50
exon number 3
gene id G97410
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 22594496 ~ 22595277 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtctctgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtctctgtgtgtgtgtctctgtctctgtgtgtgtgtctctgtctctgtgtgtgtgtgtgtctctgtctctgtgtgtgtgtctctgtctctgtgtgtgtgtctctgtctctgtgtgtgtgtctctgtctctgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtgtctct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU131429 lncRNA upstream 17948 22571754 ~ 22576548 (+) False LOC120566218
TU131431 lncRNA upstream 17948 22571795 ~ 22576548 (+) True LOC120566218
TU131333 lncRNA upstream 271641 22322492 ~ 22322855 (+) True G97338
TU131330 lncRNA upstream 278138 22313648 ~ 22316358 (+) True G97335
TU131289 lncRNA upstream 420103 22158057 ~ 22174393 (+) True G97297
TU131444 lncRNA downstream 62222 22657499 ~ 22676178 (+) True rnf11b
TU131445 lncRNA downstream 62222 22657499 ~ 22674237 (+) False rnf11b
XR_005640278.1 lncRNA downstream 185330 22780607 ~ 22800145 (+) True LOC120565733
TU131455 lncRNA downstream 185497 22780774 ~ 22799672 (+) False LOC120565733
TU131548 lncRNA downstream 270550 22865827 ~ 22870448 (+) True G97485
XM_039810960.1 mRNA upstream 5177 22584206 ~ 22589319 (+) True calr
XM_039810961.1 mRNA upstream 11841 22577197 ~ 22582655 (+) True tor3a
XM_039812096.1 mRNA upstream 24196 22530087 ~ 22570300 (+) False osbpl9
XM_039812097.1 mRNA upstream 24196 22530087 ~ 22570300 (+) False osbpl9
XM_039812099.1 mRNA upstream 24196 22548893 ~ 22570300 (+) True osbpl9
XM_039812084.1 mRNA downstream 29808 22625085 ~ 22657026 (+) True ttc39a
XM_039812085.1 mRNA downstream 37357 22632634 ~ 22657026 (+) False ttc39a
XM_039812087.1 mRNA downstream 62203 22657480 ~ 22673689 (+) False rnf11b
XM_039811742.1 mRNA downstream 102803 22698080 ~ 22764088 (+) True faf1
XM_039810236.1 mRNA downstream 179731 22775008 ~ 22778191 (+) True dmrta2
XR_005640351.1 other upstream 18294 22576129 ~ 22576202 (+) True LOC120566217
XR_005640354.1 other upstream 19348 22575067 ~ 22575148 (+) True LOC120566220
XR_005640355.1 other upstream 19572 22574843 ~ 22574924 (+) True LOC120566221
XR_005640359.1 other upstream 19824 22574591 ~ 22574672 (+) True LOC120566225
XR_005640360.1 other upstream 20804 22573630 ~ 22573692 (+) True LOC120566226
TU131620 other downstream 726245 23321522 ~ 23321909 (+) False pole4
TU131697 other downstream 879505 23474782 ~ 23477818 (+) True G97596
TU132257 other downstream 2186641 24781918 ~ 24783881 (+) True G98012
TU132285 other downstream 2257024 24852301 ~ 24873874 (+) False elovl1b
TU132286 other downstream 2272740 24868017 ~ 24873874 (+) False elovl1b

Expression Profile